Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2250 |
Symbol | rplP0 |
ID | 5409938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2318915 |
End bp | 2319763 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640869502 |
Product | acidic ribosomal protein P0 |
Protein accession | YP_001405407 |
Protein GI | 154151789 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000108628 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.150308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTCT ATACCCACCA CCTGCCCGCG TGGAAGAAAG ACGAGGTCGC GGATATCAAG AAGCACGCGA AAGAGTTCAC CCTGATCGGG CTTGTCGACA TGTACGGCAT TCCTGCACAG CAGGTGCAGC AGATCCGGCG TAACCTTCGG GGTAAGGCAG TTATCAAGGT CACAAGAAAC ACCCTAATCG AGCACGCACT CGGCGAGATT GGCGGGGACA CGAAGGGACT CACCAGGTTT ATCTCCGGAC ACTCCGCGGT GATCTTCTCC AACGACAACC CGTTCAAGCT CTACAAGCAG CTCGAGAAGA CCAAGACCAA GATGGCCGCA AAAGCCGGCG AGACCGCTCC CGAGGACATT GTCATCGAGA AGGGGCCCAC GAGCTTCAAG CCCGGCCCGA TTGTCGGGGA ACTCCAGCAG GCCGGCATCC CCGCAGCCAT CGAAGGTGGC AAGGTCAAGA TCAGGGAGAC CAAGACCGTT GTCAAGAAAG GCGCGGTCAT CTCGGCAAAG CTTGCCGATG TGCTTGTCAA GCTTGACATC AAGCCCATGG ATGTGGGGCT CGCCCTCCAG GCAGCCTTCC ATGATGGCAG CCTGTACGAA CCGTCAGTGC TTGCCGTGGA TGAGGAGAAA ATCCTCGCCC AGATCCAGCT CGCGGGCCAG CAGGCGTTTA ACCTGTCGGT GAACGCGGCG ATCCCGACCA GGGAGACCCT GGCAGCGATC CTGACCAAGG CCGTCAGGGA CGCACGCGGT CTTGCGATCG AGGCAGACGT CTATGAAAAA GACGTTATCG ATGCGATTAT TGGTAAAGCC CACAGAGAAA GCCAGGCAAT CAAGAGCCTG GTAAAATAA
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Protein sequence | MAVYTHHLPA WKKDEVADIK KHAKEFTLIG LVDMYGIPAQ QVQQIRRNLR GKAVIKVTRN TLIEHALGEI GGDTKGLTRF ISGHSAVIFS NDNPFKLYKQ LEKTKTKMAA KAGETAPEDI VIEKGPTSFK PGPIVGELQQ AGIPAAIEGG KVKIRETKTV VKKGAVISAK LADVLVKLDI KPMDVGLALQ AAFHDGSLYE PSVLAVDEEK ILAQIQLAGQ QAFNLSVNAA IPTRETLAAI LTKAVRDARG LAIEADVYEK DVIDAIIGKA HRESQAIKSL VK
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