Gene Mboo_2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2229 
Symbol 
ID5410357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2299649 
End bp2300590 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content61% 
IMG OID640869481 
ProductCBS domain-containing protein 
Protein accessionYP_001405386 
Protein GI154151768 
COG category[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0517] FOG: CBS domain
[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGGA ACGGGCAGGT TGCAAAACAG GGCGACCGGC TCCTCAAAAT GCGGGGAAAA 
CTTGATCGCG GCCCGGTTGA GTTCAAATCC CATATCGTAC AGCAGGAAGG CGAAGTGATG
GCGATTGCGA CACGGGATGT TATCTCTGTC CCGCCCACAC AGAGTATTAT CAGCGCCGTG
GCAACGATGA CAGACTGCGG GTTCCGCCGG CTTCCCGTGA CCGATCCCGG TACAAGGAAA
CTGCGCGGGA TCGTCACCTC GGGCGACGTG ATCAGTTTCA TGGGCGGGGG TGACAAGTAC
CGTCTGGTCA GTGTCCGGCA CAACGGTAAC CTGCGTGCCG CGGTAAACGA GAGCGTTCGT
ACGCTCATGA CACCCAAGCC CGAAACCCTG CCGCGGAATG CGCGGCTTCT GGATGCCCTC
AAAATCATCG TGGGAAAGAA GATCGGCGGG CTCCCGATTG TGGATGATGA CGGGACGCTT
GCCGGCATCC TGACAGAACG GGACGTGTTG CGGATGCTTG CCGCAGAGCA CAGCCCGCTC
ACGATCGAGG ATGTGATGAG TTCCTCCCTG CGGGTGACCG CGCCGGACAG CCCGCTTTCC
GAGGTGACAA AAGACATGAC CCGGTTCCGG TTCCGCCGGC TTCCCGTGAT CAGCGACGAT
GTGCTCTTTG GTATCATCAC CGCCACCGAC ATCATGCGCT ATCTGGGGAG CCGCGAGGTC
TTCTCCCGGC TTGAGACCGG ACATGTCGCT GAGGTGATGG CGCTCCCGGT ACGCACGCTC
ATGGCCGGCA GCCTCTTTAC CACCACCCCG GAGACGCCTA TCAACGAGGC GGCGCGGGAG
ATGCTGTCTA AGAACATCGG GGCGCTCCCG GTCATCGAGG ACTCACGCCT CGTTGGCCTG
GTCACCGAAT TCGATCTCGT GCGGGGTTTC TCCGCTGAGT AG
 
Protein sequence
MHRNGQVAKQ GDRLLKMRGK LDRGPVEFKS HIVQQEGEVM AIATRDVISV PPTQSIISAV 
ATMTDCGFRR LPVTDPGTRK LRGIVTSGDV ISFMGGGDKY RLVSVRHNGN LRAAVNESVR
TLMTPKPETL PRNARLLDAL KIIVGKKIGG LPIVDDDGTL AGILTERDVL RMLAAEHSPL
TIEDVMSSSL RVTAPDSPLS EVTKDMTRFR FRRLPVISDD VLFGIITATD IMRYLGSREV
FSRLETGHVA EVMALPVRTL MAGSLFTTTP ETPINEAARE MLSKNIGALP VIEDSRLVGL
VTEFDLVRGF SAE