Gene Mboo_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2228 
Symbol 
ID5410356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2298642 
End bp2299418 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content56% 
IMG OID640869480 
Productsignal-transduction protein 
Protein accessionYP_001405385 
Protein GI154151767 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAG AACTGTTTGT TAAAGATATC ATGGCAAAAC CAACGACCAT AGCCAAATCC 
GCAAAGATCA CTGAAGCGCT CGACAAGATG CTTGCCGAAG GCATTGATCC ATTGATTGCG
CTCAACAATA ACTCCGTGGT CGGCACGGTC TCCCGCGAGG CGATTGCAGA GAAGCTGGGC
AGCAAACAGA ATACGGCGAT TGCCCCGGCT GCCATCCACG TAGCAAGCGT GGTCAAAGAG
GACTTTACCA GCGTCTATCC CGATGAGAGT GTGAACGTGC TCGTTCCCCT GCTCCAGCAG
TACAAGCTGG TGGTTGTGTA CGACAGCGAG CACCACCTGA TCGGCCAGGT GACGGCAATC
GACCTGCTCA GGAAATACCC TTATACCGGG TCCCTCAGGG ATGCTCTGGA CAAGGCGGTC
ACCATCGAGG CGGACGAGCG CGTGGTCCAC CTGCGGCGCC GGATGCTGGA CGATGCGGTC
TCACGGTTTG TGGTCACGGA GAACAACAAG CTGACCGGTA TTGTCACCGA GACCGATGTG
GCGGTTGCGA TGCGGAAGTT CCGGGAGGCA GTTAAAGACC AGCATCAGGA CCACCAGATA
CGGAACCTGC TGGTAAAAGA CATTATGAGC GCCCCGCTTC TGTCCCTGGA TATCGGCGCC
GGTTACCAGA GCGTAGTTGA CCTGATGGTC AAAAAGAATA TCAGCACGGT GCCTGTCCTG
GACAAAGGGA AACTGGCGGG CCTTGTTACC CGTCGTTCAC TGGTACGGGC CCTCTGA
 
Protein sequence
MTKELFVKDI MAKPTTIAKS AKITEALDKM LAEGIDPLIA LNNNSVVGTV SREAIAEKLG 
SKQNTAIAPA AIHVASVVKE DFTSVYPDES VNVLVPLLQQ YKLVVVYDSE HHLIGQVTAI
DLLRKYPYTG SLRDALDKAV TIEADERVVH LRRRMLDDAV SRFVVTENNK LTGIVTETDV
AVAMRKFREA VKDQHQDHQI RNLLVKDIMS APLLSLDIGA GYQSVVDLMV KKNISTVPVL
DKGKLAGLVT RRSLVRAL