Gene Mboo_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2213 
Symbol 
ID5411233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2288945 
End bp2289814 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content60% 
IMG OID640869463 
Productmevalonate kinase 
Protein accessionYP_001405370 
Protein GI154151752 
COG category[I] Lipid transport and metabolism 
COG ID[COG1577] Mevalonate kinase 
TIGRFAM ID[TIGR00549] mevalonate kinase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAACGT GGAGTGCGCC GGGCAAGGTA TTTCTGTTCG GCGAGCATGC AGTAGTGTAC 
GGAAAGCCCG GCATTGCTAT GGCTATCAAG CCCCGGGTCT TTGTGACAGT ACGGAAATCC
AAACGCCCGG CCCGGGCAAA ATCTCCCTAT ATCGACGGAT GTTTTGAGGC AATGGGCGTA
GTCGGGAGCG TGTACATTAA CTCCCAGATC CCCAGTTCAT CAGGCCTGGG ATCGTCTGCG
GCGGTCACGG TCGCGACGCT ATCGGCCATA AATGACGAGT TTGCCCTCAA TAAAAGCAGG
GAAGATATCG CAAACATGGC ATTTGAGATC GAAAAGACGG TCCAGAAGGG ACGGGCGAGC
CCCACGGATA CCACGGTCTC CACCTATGGA GGCATCGTGC TTATCACCGG CAGCTCCCGC
AGGCGCCTTC CCCCCCAGAA CATGCACCTG GTGATTGGCG ATTCCCTTGT TTCGCACAGC
ACAGCAAAGA TGGTAGAGCA GGTGGCAGAA CTAAAGAAGA CAAACCCCGG GATCGTGGAC
CCGATCCTGG ACGCGATCGA GGGCGTGGGC CTTGCCGCTA TCCACCATTT AAGCAACCCC
AAGGAACTGG GACGATACAT GAACATGAAC CACGCGCTTC TCGAAGCTAT GGGCGTCGGG
CATCCGCAGC TCTCCCGGCT CGTGCTTGCC TCCCGGTCTG CCGGGGCATT CGGTGCAAAG
ATCACCGGGG CCGGTGGCGG GGGCTGCATG GTGGCTCTCT GCGCAAAGCC GGTCCGGCAC
CGGGTGGCGC AGGCAATCCA GTCCTGCGAT GCACGGGCGA TCGTGACCGG GCTCGATACC
GAGGGAGCGC GGAAGGAGAA GAATGTCTGA
 
Protein sequence
MATWSAPGKV FLFGEHAVVY GKPGIAMAIK PRVFVTVRKS KRPARAKSPY IDGCFEAMGV 
VGSVYINSQI PSSSGLGSSA AVTVATLSAI NDEFALNKSR EDIANMAFEI EKTVQKGRAS
PTDTTVSTYG GIVLITGSSR RRLPPQNMHL VIGDSLVSHS TAKMVEQVAE LKKTNPGIVD
PILDAIEGVG LAAIHHLSNP KELGRYMNMN HALLEAMGVG HPQLSRLVLA SRSAGAFGAK
ITGAGGGGCM VALCAKPVRH RVAQAIQSCD ARAIVTGLDT EGARKEKNV