Gene Mboo_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2185 
Symbol 
ID5412218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2260242 
End bp2263682 
Gene Length3441 bp 
Protein Length1146 aa 
Translation table11 
GC content56% 
IMG OID640869435 
Productchromosome segregation protein SMC 
Protein accessionYP_001405342 
Protein GI154151724 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02169] chromosome segregation protein SMC, primarily archaeal type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACATCA CAGAGCTCGA GATAGATAAT TTCAAGTCTT TTTCAAAAAA GACAAAAATT 
CCCTTTTTAG AGGGTTTCAC CGTCATATCC GGTCCGAACG GCTCGGGTAA GAGCAATATC
ATAGACTCTA TCCTCTTTGT GCTTGCCCTG TCGAGTTCCC GCAACCTGCG CGCCGAGAAG
CTCACCGATC TGATCAACCT CAATTCTGGG AAAAATATTG CCGAGGTAGC CATTGCTTTC
TCGGATGGGA CGAAGATCCG GCGCCGGATA AAAAGGACCG GGAACGGCTA CTATAGCTAC
AACTACCTCA ACGACCGGCT CTGCAAGCAG AGCGATATCG TTGACCACCT CTCAAAGTTC
GGGATCATCC CGCACGGGTA CAATGTCGTG ATGCAGGGTG ATGTGACCCG GATTATGGAG
ATGAGCGACT TCGAGCGGCG GAAGATTATC GACGAGATTG CCGGGGTCTC CGAATTCGAT
ACCAAGAAAC AGCAGGCCCT CTCCGAGCTC GATGTGGTCA GAGAGCGTAT CGAGCGCGAG
GAGCTCCTGC TCATCGAGCT CACGAAAAGG GCACACGAGC TCAAAAAAGA GCGGGAGCAC
GCCCTTGAGT ACCAGAAGTG GCAAAAAGAG CTTGCCTTTT TCCAGGGGTG CCGGTCTGCC
GCCCAGATCC ATGACAAGGA GAAGGAGCGG GCAACTCTCT TATCCTCTGC CGAAGAGCAG
AAGATCAGGA TTTCCCGGCT TGAGGCCGAC CGGAGCATTG AGGAGAACGA GCTCGCCTAC
CTTAAGGCTG ATCTCGCAGA CGTGGACGAG CTTATCAACC AGAAAAGCGG GCCAGACTAC
CTGAAACTGA TCGCGGATCT TGAAGAAGCC AAGAGCGGGA TCAAGCTTGC GGAGCAAACG
ATTGGCCGGC TCAAAAAGGA TAAGGAGGCC AATCTCGAAG GGATCAACCG GGTCTTTGCG
GATACGAAAA GGGCCGAGGC CCGGGTTGCC GAGCTTTCCG ACCAGATACG GACTCTCTCC
ATCGACCGGA CCAATATCGC CATGGAAGTG GCGACCTCAA AAGCGCAGGT CGAAAAGATC
GAGACCGAGA TCCGCCAGTA CTCCTCGGAT ACGGAGGAGG CACGGCAGCA GCTCTTTGCC
CTGATGGAGG AGGCGGAGGC AAAGAAAGGG GACCGTTCCG CCATCCTCCG CCAGCAGGAT
ATCCTTATCG AAAAGAGCCG GATGCGGACG AGCGAACTCG AACGCCTGAC TGTGCTCCAG
AAGCAGCTTG ACGAGGAGTA TGCGGATAAG CAGGCGCAGC TTGCAGAGAA TGAGAGGACT
GTTGCCGATC TTACTGGCCG GAAAAAAGAG CTTGACCGGA ATCTTTCCGA GATTGAGAGT
ACCCTTTTTG CCCAGCGTTC GTCCCTTGAA CGGCTCCGCG GCGAGATCCG GGATGCCGAG
CAGGATGCAT TCCGGCTGGA GGCTGCCCAG CAGGCCCGGG GTGAGTCTGG CGGGAAGGCG
ATTGAAGCGG TAAAGGCCAT TGAGGGTGTC CACGGCACCA TCATGGAGCT GGGTCGGGCT
CCCCCGGAGT ACGCGACCGC CCTCAACGTT GCTGCAGGAA ACAAGATTCA GTTCGTTGTC
TGCGATACTG ACCAGATTGC AACCGATGCG ATACGGTACT TAAAAGACGA GCGGCTCGGG
CGGGTTACGT TTCTCCCCTT AAACAAGCTC AAACCCCCGC AGCTGCCTCC TATAAAAGAG
CCGGGTATTA TTGACTATGC GGTCAACCTG CTCGACTACG ATCCCGTGTA CGACAAGGCC
TTTGCCATTG CGCTCGGATC GACCGTGGTG GTTGATACCC TTGACCGGGC AAGGAAACTG
ATCGGTAAGT ACCGGATGGT CACCCTTGAA GGGGAACTGC TGGAGAAGAG CGGGGCGATG
ACCGGCGGTT CGGCAAAGAA GCCGGCCAGG GGTTTTGGTG CTGCCGTTGA CGATGAGATC
ATCCGGATCC GCTCGCACCT TGCCGAACTT TCCGGTGAGG CGACAACGCT TGAGGCGGCA
ATAAAGAGGA TGACCGAGGA GGTAGACGGC AAACGGGCAA CCCGGGGCGG GATCGACCAG
GATTTGGCCC GGGCCGGTGC GGTCACCGAG GAATATACCC GGCGGTTTGA GGCGATCACG
ATCGAGAAGC AGACAATAGA GGCGGCGGTC GCCAGACAGC GGGAAGAAAC CAGCACCAGC
GCTGCCGAAC TGTCTGTACT TGAGGGAGAT CTCTTCAAGG TCACTGAAGG GATCAATGCG
ATAACGGCGA AAATTGACGG CATAAAGAAG AAACTTGACG ATACCAACAT CCCTGCCCTT
ACCGACCAGA TGGAGAAGAA GAAAAAGGAG ATCGAAGAGG CGGAACGGCG CCTCAGGAAC
AAGGAGGCGG ACATGAACGA CGCCTCCCGC GAACGCCAGC ACTTCACTGC CCGTATCGGC
GAACTCACCG AGGAAAGGGC ACGGTTTGAC GAGCGCAACA AACAGATCGA TGCGGAAGTA
GCTGCATCCA ATGACCAGAT CACCTCTCTC AAATCTGTGA TTGTCGGGCT TGAAGAGAAA
CAGAAGCAGT TCTCCGGGGA ACTTGATGAG CTGCGCAAGA AACGGGCCGG GATCTCCGAC
AGCATCCATG CCTCGGAAAC AAAACTGATC AAGTTTGATT CCGACAAGGA GCGCTTCACT
ATCCAGCTAT CAGCCCTTGA GGAGCGGGCA ACAGCGCTCG CAAATGAGAT CGCCTCCCTC
AAGGCCATTG TGGGAGAAGT AAGCACCGAT CTCACCCTTA CCGAGATCGA GGGAAAGATT
GCCGATGCCG AGCTTGCGCT CCATAAGATT GGCGCCGTCA ACATGCTCGC CATCGAGGAG
TACGAGAAGA TAGAACGGCA GGTGCAGGAA AGAACGGAGC GCAAGGACAC CCTCTCCAAG
GAGCGGGAGA CCTTAATCGA GCGGATCGAG AAGTACGAGC AGATGAAGTT CGAGGCGTTC
ATGACCGCAT TCAAAGCCAT TGACACGAAC TTCCGTGAGA TCTTTGCCCG TCTTACAAGC
GGGAGCGGGA ACCTGGTGCT GGAGAACGAA GAGGATCCCT TCACCGGTGG ACTCACATTT
GCGGTCAAGC CCCGGGACAA GAAAGTTCAC CTCCTCTCGT CCCTCTCGGG AGGGGAGAAG
TCGCTGACCA CATTGGCGTT TATCTTCTCC ATCCAGCACC ACATTCCGGC CCCCTTCTAC
GCTTTTGACG AGGTGGATAT GTCGCTTGAC GGCGCGAACG TGGAACGGAT TGCGGCCATG
ATCCAGGAAC TTGCCCCCTC GTCCCAGTTT GTCATTGTCT CCCTGCGTAA GCCCATGATC
GAGGCAGCAC AGCGGATCAT GGGCGTTACG ATCCGGCCGG ACAAGAGCAC GCTCGTTACC
GGGGTAAAGG TGAATGGCTG A
 
Protein sequence
MHITELEIDN FKSFSKKTKI PFLEGFTVIS GPNGSGKSNI IDSILFVLAL SSSRNLRAEK 
LTDLINLNSG KNIAEVAIAF SDGTKIRRRI KRTGNGYYSY NYLNDRLCKQ SDIVDHLSKF
GIIPHGYNVV MQGDVTRIME MSDFERRKII DEIAGVSEFD TKKQQALSEL DVVRERIERE
ELLLIELTKR AHELKKEREH ALEYQKWQKE LAFFQGCRSA AQIHDKEKER ATLLSSAEEQ
KIRISRLEAD RSIEENELAY LKADLADVDE LINQKSGPDY LKLIADLEEA KSGIKLAEQT
IGRLKKDKEA NLEGINRVFA DTKRAEARVA ELSDQIRTLS IDRTNIAMEV ATSKAQVEKI
ETEIRQYSSD TEEARQQLFA LMEEAEAKKG DRSAILRQQD ILIEKSRMRT SELERLTVLQ
KQLDEEYADK QAQLAENERT VADLTGRKKE LDRNLSEIES TLFAQRSSLE RLRGEIRDAE
QDAFRLEAAQ QARGESGGKA IEAVKAIEGV HGTIMELGRA PPEYATALNV AAGNKIQFVV
CDTDQIATDA IRYLKDERLG RVTFLPLNKL KPPQLPPIKE PGIIDYAVNL LDYDPVYDKA
FAIALGSTVV VDTLDRARKL IGKYRMVTLE GELLEKSGAM TGGSAKKPAR GFGAAVDDEI
IRIRSHLAEL SGEATTLEAA IKRMTEEVDG KRATRGGIDQ DLARAGAVTE EYTRRFEAIT
IEKQTIEAAV ARQREETSTS AAELSVLEGD LFKVTEGINA ITAKIDGIKK KLDDTNIPAL
TDQMEKKKKE IEEAERRLRN KEADMNDASR ERQHFTARIG ELTEERARFD ERNKQIDAEV
AASNDQITSL KSVIVGLEEK QKQFSGELDE LRKKRAGISD SIHASETKLI KFDSDKERFT
IQLSALEERA TALANEIASL KAIVGEVSTD LTLTEIEGKI ADAELALHKI GAVNMLAIEE
YEKIERQVQE RTERKDTLSK ERETLIERIE KYEQMKFEAF MTAFKAIDTN FREIFARLTS
GSGNLVLENE EDPFTGGLTF AVKPRDKKVH LLSSLSGGEK SLTTLAFIFS IQHHIPAPFY
AFDEVDMSLD GANVERIAAM IQELAPSSQF VIVSLRKPMI EAAQRIMGVT IRPDKSTLVT
GVKVNG