| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2117 |
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| Symbol | |
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| ID | 5411215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2191052 |
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| End bp | 2192170 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640869362 |
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| Product | thiamine pyrophosphate enzyme-like TPP-binding |
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| Protein accession | YP_001405274 |
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| Protein GI | 154151656 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
[COG4032] Predicted thiamine-pyrophosphate-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAG ACCAGATCAT CGGGGAACTA AAAAACCAGG GGATCGACCT AATCGCTTCG
ATCCCGTGCG ACAAGGCAAA GGGACTCTTT TTTGCGCTGC CGGACCACTT CCGGCATATT
GGCCTGACCC GGGAAGAGGA CGGGGTGGGG ATAGCGGCAG GGGCGTACCT TGCCGGGGCC
CACCCGGCGC TTGCCATCCA GAGCTCAGGC CTTGGGAACA TGTTAAACGC AATACTCTCC
CTCACGATAA CCTTTGGCCT TCCGCTCCCG ATCCTTGCCA GCTGGCGGGG GTGCGAGGGA
GAGAAGATCC CGGCCCAGAT CCCATTCAAC CGCCCGCTCC CGGCTATTCT TTCCGCTGCC
GGGATTGCCT GCACAGAAGT CTCCGGGCCT GATGCTGCGC ATGAGATCGG GAAGGCGGTT
GCGGCAGCGT ACCGGAACCG GGCGCCGCAG GTCATCCTCC TCCGCCCGGA ATGCTTTTCC
GAATGCGGCG GCAGAACAGT GTTGCCGCAA GACCAGCCGC CACGTCTATT ATCGTTCTGT
TATACCCGGA GCTGGCGGCC TCCCGTTATG ACCAGAGACG ATGCCATCCG GGTCATTGCC
GGAAGTGTAC AGGATGAAAT ACTGGTCGCA AACATCGGTG TCCCATCAAA AGAACTCTAC
GCGGCGAAGG ACCGGCCGGA GAACTTCTAC ATGCTGGGCA GCTATACGCA GGCATCTGCA
ATCGGCCTTG GTATCGCGGC TGCGCGCCCG GACAAACACG TGATCGTGAT TGACGGTGAC
GGAAGCCTGC TTGGCTCGGC AATCCTCCCC GTTATTGCCG CAGCCGGCCC GAAAAATCTC
ACTATTGCCT GCCTTGACAA CGGCGTCTTT GGGAGTACCG GTAACCAGCC CCGGCCCGGA
CAGGACAGCG CAGACCTCGC CCTCATGGCT CTTGGGGCGG GATTTGCACA CGCTTCAACG
GTACACGAGA ACTGGGAATT TCAAGCCGCA CTTTCGCAGA AAAACCGAGA AGGGCCGACA
TTTATCCATG CCCGTATCCG GCCCGGGAAC AGCGAGGTCC CCAATATCCC TCTTTCACCC
GAAAAGATAC GGGACCGGTT CGTGGCTGCA CTCTCATGA
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| Protein sequence | MDEDQIIGEL KNQGIDLIAS IPCDKAKGLF FALPDHFRHI GLTREEDGVG IAAGAYLAGA
HPALAIQSSG LGNMLNAILS LTITFGLPLP ILASWRGCEG EKIPAQIPFN RPLPAILSAA
GIACTEVSGP DAAHEIGKAV AAAYRNRAPQ VILLRPECFS ECGGRTVLPQ DQPPRLLSFC
YTRSWRPPVM TRDDAIRVIA GSVQDEILVA NIGVPSKELY AAKDRPENFY MLGSYTQASA
IGLGIAAARP DKHVIVIDGD GSLLGSAILP VIAAAGPKNL TIACLDNGVF GSTGNQPRPG
QDSADLALMA LGAGFAHAST VHENWEFQAA LSQKNREGPT FIHARIRPGN SEVPNIPLSP
EKIRDRFVAA LS
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