Gene Mboo_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2103 
Symbol 
ID5410637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2176057 
End bp2177049 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content57% 
IMG OID640869348 
Productsmall GTP-binding protein 
Protein accessionYP_001405260 
Protein GI154151642 
COG category[R] General function prediction only 
COG ID[COG1084] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATTCG AACGGATGCC AACAGTGCCC ACTGCAGATG AGATCCTTGA TCGGAGCTTT 
CGCCGTGCAG CAAAGAAACG TAAAGAGAAG CTCAATAAGG ACCGGGCAAA CGAGGAGTTT
GTAAGGGCGG TCGGTGCAGC AATCCATGAC CGGCTGGTCT ATATCATCCG GGGGTTCCCT
GAGTTTGAAG AGATACCTCC TTTTTACCGG GAGATGGCCG AGATCCTCTA CGGGGTAGAT
AAGATCAAGC AGTCCCTTGG GGCGGTCGGA TGGGCGGCCA AACACACCAA AATGGTAGGC
CACGAGATTG CGGTGCAGAC CAGAAAGGCC ACTGATACCA TGGTATACCG GAAGCGTGCG
GTGGCCCGCC TCGCCTCCAT GGTCCACCAG ATCAACAAGG ACCTGCTGTT CTTAAACGAA
GTCAGAAACA CTCTTCGGAA ACTGCCCCAT ATCGAGGACG CGTTCACGGT TGTGATCGCA
GGCTACCCCA ACGTGGGTAA GTCCTCGTTT ATCCGGCTCG TCTCATCGGC AACGCCCGAG
ATCGCGTCCT ACCCGTTCAC GACAAAAGGC GTGATTGTCG GGCTTCGCGA GGAGGGCCGG
ATCCGCATCC AGTTCGTGGA CACGCCCGGC ATCCTTGACC GTCCCGCAGA GGAAAGAAAC
CCCATCGAGA GGCAGGCGCT CTCAGCGATG ATGAACGTCG CAAGCGTGAT CCTCTTTATC
CTCGACCCGT CGGAGCACTG CGGGTACCCG ATGGAGATGC AGCTGCGCCT TTTGGATGAG
GTAAAGGGCA TGGTTAGGGT CCCGGTGATT GTCGTCGCGA ACAAATCCGA TATTAAGGTC
GCCGCGGGTT ACCGCTCCAT GTCCACGGAA ACAAAAAACG GGGTTGATGA GGTGCTCGCC
GAGCTCCTCT CACACCGCAA GGCCTGGGAA GAATCACACA AAGCCGATGA GAGCCCAGCC
AATGAGAAAA CCGACGATAG TCCCGCCGTT TAA
 
Protein sequence
MEFERMPTVP TADEILDRSF RRAAKKRKEK LNKDRANEEF VRAVGAAIHD RLVYIIRGFP 
EFEEIPPFYR EMAEILYGVD KIKQSLGAVG WAAKHTKMVG HEIAVQTRKA TDTMVYRKRA
VARLASMVHQ INKDLLFLNE VRNTLRKLPH IEDAFTVVIA GYPNVGKSSF IRLVSSATPE
IASYPFTTKG VIVGLREEGR IRIQFVDTPG ILDRPAEERN PIERQALSAM MNVASVILFI
LDPSEHCGYP MEMQLRLLDE VKGMVRVPVI VVANKSDIKV AAGYRSMSTE TKNGVDEVLA
ELLSHRKAWE ESHKADESPA NEKTDDSPAV