| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2073 |
|---|
| Symbol | |
|---|
| ID | 5409782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 2148856 |
|---|
| End bp | 2149299 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640869318 |
|---|
| Product | NusA family protein |
|---|
| Protein accession | YP_001405230 |
|---|
| Protein GI | 154151612 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01952] NusA family KH domain protein, archaeal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.115145 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCGCA ATATCGGCTT TAAGGAACGA CGCTATATTG AAGAACTGCG AATCCTCACC
CGGGCAACAG CGCTTGACTG TGTGATCGAT GACCGGTTCG ATCGGGTGAT CTACGTTATC
CGCCAGGGTG ACATGGGTCT TGCCATCGGA AAAAAAGGCG AAAACATCAA AAGGCTCCAG
AATGTTCTGG GCCGGCGCAT CGAAATGGTA GAGTATGCTG AGGACCCGGT GCTTTTTATC
ACCAATATTT TCAAACCTGC AGAAGTGATC GGAATTGAGC GCGGGGCAGA GGAGGGCCCG
GTCAACGTGC TGGTGAACAA GAAAAGCGAT CTTGGGATCG CCATAGGAAA GGCAGGCTGC
AATATCGAGA AGGCACGTAT CCTTTGCCGG CGGTTCTGTA ATCTTGAGAT TGGCGAGGTC
CTGCTTGCGG AGGGATCGGA ATGA
|
|---|
| Protein sequence | MERNIGFKER RYIEELRILT RATALDCVID DRFDRVIYVI RQGDMGLAIG KKGENIKRLQ
NVLGRRIEMV EYAEDPVLFI TNIFKPAEVI GIERGAEEGP VNVLVNKKSD LGIAIGKAGC
NIEKARILCR RFCNLEIGEV LLAEGSE
|
|---|
| |