Gene Mboo_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2061 
Symbol 
ID5409770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2138133 
End bp2139935 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content55% 
IMG OID640869306 
Productsignal transduction histidine kinase regulating citrate/malate metabolism 
Protein accessionYP_001405218 
Protein GI154151600 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.658977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC TGCCCTTTAT CCCGATTGAC ATGGTAAAGT CCGCGGTAGA GAACTTTGCC 
GTTATCGTGG CCCTGCTTCT TCTCTATTAC TTTATTCCGG ATACTGTTCG TTCGCGGTCA
AAACTGCTCT TCTCCCTTTG TGTCGGCCTG ATTTTCGGTT TTATCGCGTT TATCACCATC
CCTGCACTCT GGCAGGCCCT GGGCGCGGCC CCTGCAGCCC CGCTCCTGGG TTTTGACCCG
CTTTCCCTTG CCGGCCCGAC TGCTGGTGCA CCCCTGCAGG ATCTTGGAAA CCGGATCCTT
GGCATTAACG TCATTCTTGT TCCCCTCTCC GGGTTTATTG CCGGCCCGGT ATCGGCCGTC
ATTGTGGCCG GCGCACTCCT TCTCGGGAGT CTTGCAGCAG GAGGACCTCC CCAGCCTATG
GATATCATAA CTCTCGTACT GGGTATTCTT CTCGGTGCTC TCTTTTACTG GTGCCGGACA
TGGGACAGGT TCCCCCGATC CTATCTGGTG CAGGTTATCC TTCTTGGAGC GGGATTTGCC
CTTATGGATT CGGTTCTTCT GGTAATCAGA TCCCAGGATC AGGCTTCAAC AGGCCCCGGA
ACGCTTCCCC TCACCTTGCC ATCATTTGTG ATTTGTTGTG TCGGTATCAT CATTCTCGGG
CTCATTGTCG GATTTATCGA CCGGAAGAAA CAGGCGGAAA AGGAGATCCG TGATTACCGG
GATCGTCTCG AAGGCCTCGT TAAGGAGCGG ACAACCGAGC TCCGGCAGGC AAACTCACTT
TTAAAAGCTG CATTCGAGGC CACAGCGGAC GGGATCGTTG TTACAGATAC GGAAGATGTG
ATCCGTGGGT ACAACCGGAA GGCTGCGCGG ATCCTGAATC TTCCCGAAAG CCCCCCGCAG
GATGCCGGGG AGAGCAGGAG ATATACAGAT CAGATCGTTG CTTCCCTGTC CGAACCCGAA
AAAGTAATCC GGCATTTTGC AGAACTGGCA GCGTCGTCAG GACAGGTGGT CACAACCGAT
GTCAAATTTA CCGGCGGCGG CCAGTTTGAG CTCTACGTCC ACCCGCAGGA GATTGGCAAT
CAGATCATCG GCCGTGTCTG GAGCCTCCAC GATATCACTG AACAGCGCAT GGCCGAGGAG
GCACTCCGTT CCGCCAACAA TAAGCTGATC CTGCTCTCCA GTATCACCCG GCATGATATC
CTCAACCAGC TGACCGCTCT TCATGCCTGC ATTGATCTCA TGAAAGAAAA TCCTGAAGAT
CGTGCAGTCC CTGGTTACCT TGATCTCATG GAGAAGACGA TCGAGGTGAT CCGTCTTCAG
GTAGAGTTCA CCAGCGACTA CCAGGATCTC GGGCAGAAAG AACCTGTCTG GCAGGATATC
TGCCAGGTGT TTCTTGCAGC TGCAGAACCG TTTGCCAACC GGAATATTAC GTTTTCCTGC
GATACCGGCG CGCTCGAATG CTACGCGGAT GCCCTGATCG GACGGGTATT CTACAATATG
ATCGACAATT CGATCCGGCA CGGCGGGTAT GTATCTGCCA TACGGTTGTT CCTTGAAAAG
GCCGATCCGG ATCTCATCCT TGTGTACGAG GACAACGGCA TTGGTGTGGC TCCCGAGGAG
AAGGATAAGA TCTTTTTAAA AGGGTTTGGG AAGCACACCG GCCTTGGGAT GTTTCTTATC
CGCGAGATCC TCTCCATTAC CGGGATGACG ATCCGGGAGA CCGGCATCCC CGGTACGGGG
GTCCGGTTTG AGATCAGGAT CCCGGCCGGA GCGTTCAAGT TCCGGCCGAC CACCGGGAAA
TGA
 
Protein sequence
MIDLPFIPID MVKSAVENFA VIVALLLLYY FIPDTVRSRS KLLFSLCVGL IFGFIAFITI 
PALWQALGAA PAAPLLGFDP LSLAGPTAGA PLQDLGNRIL GINVILVPLS GFIAGPVSAV
IVAGALLLGS LAAGGPPQPM DIITLVLGIL LGALFYWCRT WDRFPRSYLV QVILLGAGFA
LMDSVLLVIR SQDQASTGPG TLPLTLPSFV ICCVGIIILG LIVGFIDRKK QAEKEIRDYR
DRLEGLVKER TTELRQANSL LKAAFEATAD GIVVTDTEDV IRGYNRKAAR ILNLPESPPQ
DAGESRRYTD QIVASLSEPE KVIRHFAELA ASSGQVVTTD VKFTGGGQFE LYVHPQEIGN
QIIGRVWSLH DITEQRMAEE ALRSANNKLI LLSSITRHDI LNQLTALHAC IDLMKENPED
RAVPGYLDLM EKTIEVIRLQ VEFTSDYQDL GQKEPVWQDI CQVFLAAAEP FANRNITFSC
DTGALECYAD ALIGRVFYNM IDNSIRHGGY VSAIRLFLEK ADPDLILVYE DNGIGVAPEE
KDKIFLKGFG KHTGLGMFLI REILSITGMT IRETGIPGTG VRFEIRIPAG AFKFRPTTGK