| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2061 |
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| Symbol | |
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| ID | 5409770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 2138133 |
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| End bp | 2139935 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640869306 |
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| Product | signal transduction histidine kinase regulating citrate/malate metabolism |
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| Protein accession | YP_001405218 |
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| Protein GI | 154151600 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.658977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATC TGCCCTTTAT CCCGATTGAC ATGGTAAAGT CCGCGGTAGA GAACTTTGCC
GTTATCGTGG CCCTGCTTCT TCTCTATTAC TTTATTCCGG ATACTGTTCG TTCGCGGTCA
AAACTGCTCT TCTCCCTTTG TGTCGGCCTG ATTTTCGGTT TTATCGCGTT TATCACCATC
CCTGCACTCT GGCAGGCCCT GGGCGCGGCC CCTGCAGCCC CGCTCCTGGG TTTTGACCCG
CTTTCCCTTG CCGGCCCGAC TGCTGGTGCA CCCCTGCAGG ATCTTGGAAA CCGGATCCTT
GGCATTAACG TCATTCTTGT TCCCCTCTCC GGGTTTATTG CCGGCCCGGT ATCGGCCGTC
ATTGTGGCCG GCGCACTCCT TCTCGGGAGT CTTGCAGCAG GAGGACCTCC CCAGCCTATG
GATATCATAA CTCTCGTACT GGGTATTCTT CTCGGTGCTC TCTTTTACTG GTGCCGGACA
TGGGACAGGT TCCCCCGATC CTATCTGGTG CAGGTTATCC TTCTTGGAGC GGGATTTGCC
CTTATGGATT CGGTTCTTCT GGTAATCAGA TCCCAGGATC AGGCTTCAAC AGGCCCCGGA
ACGCTTCCCC TCACCTTGCC ATCATTTGTG ATTTGTTGTG TCGGTATCAT CATTCTCGGG
CTCATTGTCG GATTTATCGA CCGGAAGAAA CAGGCGGAAA AGGAGATCCG TGATTACCGG
GATCGTCTCG AAGGCCTCGT TAAGGAGCGG ACAACCGAGC TCCGGCAGGC AAACTCACTT
TTAAAAGCTG CATTCGAGGC CACAGCGGAC GGGATCGTTG TTACAGATAC GGAAGATGTG
ATCCGTGGGT ACAACCGGAA GGCTGCGCGG ATCCTGAATC TTCCCGAAAG CCCCCCGCAG
GATGCCGGGG AGAGCAGGAG ATATACAGAT CAGATCGTTG CTTCCCTGTC CGAACCCGAA
AAAGTAATCC GGCATTTTGC AGAACTGGCA GCGTCGTCAG GACAGGTGGT CACAACCGAT
GTCAAATTTA CCGGCGGCGG CCAGTTTGAG CTCTACGTCC ACCCGCAGGA GATTGGCAAT
CAGATCATCG GCCGTGTCTG GAGCCTCCAC GATATCACTG AACAGCGCAT GGCCGAGGAG
GCACTCCGTT CCGCCAACAA TAAGCTGATC CTGCTCTCCA GTATCACCCG GCATGATATC
CTCAACCAGC TGACCGCTCT TCATGCCTGC ATTGATCTCA TGAAAGAAAA TCCTGAAGAT
CGTGCAGTCC CTGGTTACCT TGATCTCATG GAGAAGACGA TCGAGGTGAT CCGTCTTCAG
GTAGAGTTCA CCAGCGACTA CCAGGATCTC GGGCAGAAAG AACCTGTCTG GCAGGATATC
TGCCAGGTGT TTCTTGCAGC TGCAGAACCG TTTGCCAACC GGAATATTAC GTTTTCCTGC
GATACCGGCG CGCTCGAATG CTACGCGGAT GCCCTGATCG GACGGGTATT CTACAATATG
ATCGACAATT CGATCCGGCA CGGCGGGTAT GTATCTGCCA TACGGTTGTT CCTTGAAAAG
GCCGATCCGG ATCTCATCCT TGTGTACGAG GACAACGGCA TTGGTGTGGC TCCCGAGGAG
AAGGATAAGA TCTTTTTAAA AGGGTTTGGG AAGCACACCG GCCTTGGGAT GTTTCTTATC
CGCGAGATCC TCTCCATTAC CGGGATGACG ATCCGGGAGA CCGGCATCCC CGGTACGGGG
GTCCGGTTTG AGATCAGGAT CCCGGCCGGA GCGTTCAAGT TCCGGCCGAC CACCGGGAAA
TGA
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| Protein sequence | MIDLPFIPID MVKSAVENFA VIVALLLLYY FIPDTVRSRS KLLFSLCVGL IFGFIAFITI
PALWQALGAA PAAPLLGFDP LSLAGPTAGA PLQDLGNRIL GINVILVPLS GFIAGPVSAV
IVAGALLLGS LAAGGPPQPM DIITLVLGIL LGALFYWCRT WDRFPRSYLV QVILLGAGFA
LMDSVLLVIR SQDQASTGPG TLPLTLPSFV ICCVGIIILG LIVGFIDRKK QAEKEIRDYR
DRLEGLVKER TTELRQANSL LKAAFEATAD GIVVTDTEDV IRGYNRKAAR ILNLPESPPQ
DAGESRRYTD QIVASLSEPE KVIRHFAELA ASSGQVVTTD VKFTGGGQFE LYVHPQEIGN
QIIGRVWSLH DITEQRMAEE ALRSANNKLI LLSSITRHDI LNQLTALHAC IDLMKENPED
RAVPGYLDLM EKTIEVIRLQ VEFTSDYQDL GQKEPVWQDI CQVFLAAAEP FANRNITFSC
DTGALECYAD ALIGRVFYNM IDNSIRHGGY VSAIRLFLEK ADPDLILVYE DNGIGVAPEE
KDKIFLKGFG KHTGLGMFLI REILSITGMT IRETGIPGTG VRFEIRIPAG AFKFRPTTGK
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