| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2021 |
|---|
| Symbol | |
|---|
| ID | 5411826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 2094791 |
|---|
| End bp | 2095459 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640869263 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001405178 |
|---|
| Protein GI | 154151560 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0625937 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCCGC GAACCATGCA GATGAAATGG ATCCTCCTCC TGGTTGTTGC GCTCATCGCC
GGGGTTGTCA TCATCGTCCC GCTTCTTGCC CCGGGGCTGA CACCGGCAGG TATCGTGCAG
GATGGCCAGG CCACGGCGGG AGATGCCCTC ATGCTTGCCA ACCAGTCCGA CATGGCCCTT
ACCCTGTATA ACGATGCCCT GGCCGCAAAC CCTGCCGATC CGGTCCTGTT AAAAAAGAAA
GCCGAGGCCC TGATACGGTC CGGGCAGACC GGGGAAGCCG AACAGATCTA CCGCCAGCTG
CTCGCCTCGT ACCCCAATGA CCCGGATGTC CTTGTCCGGA TGGGGGATTT CTCCTCCTGG
AACGGGGATT ACCCCGGGGC GATCGCGTAT TACGATTCTG CACTTACCGT CCAGCCAAAG
AACGCACAGA TCCTGTTGCG GGACGGGGAT GCAAACCTTG TGCTTGCCGC CACCCAGTAC
CAGGAACAGC ATGCCGTTGT CCTTGACTCC CTGGACACCT ACCGGACAGC CATGGACGAG
TATGCACAGG CAGAAAAGCT CGACCCCCGG CTTTCCGCGG TAGTCTCGGC CCGGACGCTC
GCGGCTGACC AGTACGAGGC TGGTGGCGAC GAGCAGAATC TTATTGCATC ACTCCGGACC
TCCTCATAA
|
|---|
| Protein sequence | MHPRTMQMKW ILLLVVALIA GVVIIVPLLA PGLTPAGIVQ DGQATAGDAL MLANQSDMAL
TLYNDALAAN PADPVLLKKK AEALIRSGQT GEAEQIYRQL LASYPNDPDV LVRMGDFSSW
NGDYPGAIAY YDSALTVQPK NAQILLRDGD ANLVLAATQY QEQHAVVLDS LDTYRTAMDE
YAQAEKLDPR LSAVVSARTL AADQYEAGGD EQNLIASLRT SS
|
|---|
| |