Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2017 |
Symbol | |
ID | 5411898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2090188 |
End bp | 2090898 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640869259 |
Product | hypothetical protein |
Protein accession | YP_001405174 |
Protein GI | 154151556 |
COG category | [R] General function prediction only |
COG ID | [COG0655] Multimeric flavodoxin WrbA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.499151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.173884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCCC CCCTAGTCGG ACGGAAGATC GGTGTAGGAA CGATTACGGC GCCGGACCCG GCGAACGTGA AGGGCACCCG CGTGGTCGGG ATCTCCGGTT CAAGCCGGCA GGAGCCGGGC ATGTCCAAGT CGGAACGCCT GCTTCTCCGG GCACTCGACC GGTGCAAGGA TCTCGGGTGC GAAACGCAGT TCCTCCGGTT AAAGGATCTT AAAATCTACG ACTGCGAAGG TAACTATTCG GAAAACCCCG CAGACTGCAC CTATCCCTGC CAGTCCACGA TGAAGTACGA GGACGACGAG ATGGACAAGG TGTACGCGGC GGTGCTGGAC TGCGATGTTC TCTTTCTGGC GACTCCCATC CGCTGGAACA ACCACTCGGC CCTTGTCCAG AAGTTCATCG AACGGATGAA CTGCATCGAG AACCAGTATT CGTGGTTCGG GAACCGGATG ATTAAAAACA AGGTGGTGAG CCTGATCATC ATCGGGCACG TGGACGGCAT GCAGCACGTG GCAGGAAATC TCCTCAACTT CTTTGCGTGG CTGGGCTTTC ACAGCCCCGA GGTTTCGATT GCCTCGTGGG TGGGGGAGAA TAACGAGGAC ACGACCAAAG ACTGGGAGCA GATAGAAAAG AACCCGTACA CGCAGGAAGA CCTCGTGGAC ATGGTCAACT CCTCGCTGCG CCTTGCCTGC AGCCTGAAAC ACCAGCCCTG A
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Protein sequence | MPSPLVGRKI GVGTITAPDP ANVKGTRVVG ISGSSRQEPG MSKSERLLLR ALDRCKDLGC ETQFLRLKDL KIYDCEGNYS ENPADCTYPC QSTMKYEDDE MDKVYAAVLD CDVLFLATPI RWNNHSALVQ KFIERMNCIE NQYSWFGNRM IKNKVVSLII IGHVDGMQHV AGNLLNFFAW LGFHSPEVSI ASWVGENNED TTKDWEQIEK NPYTQEDLVD MVNSSLRLAC SLKHQP
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