Gene Mboo_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2017 
Symbol 
ID5411898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2090188 
End bp2090898 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content58% 
IMG OID640869259 
Producthypothetical protein 
Protein accessionYP_001405174 
Protein GI154151556 
COG category[R] General function prediction only 
COG ID[COG0655] Multimeric flavodoxin WrbA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.499151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.173884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCCC CCCTAGTCGG ACGGAAGATC GGTGTAGGAA CGATTACGGC GCCGGACCCG 
GCGAACGTGA AGGGCACCCG CGTGGTCGGG ATCTCCGGTT CAAGCCGGCA GGAGCCGGGC
ATGTCCAAGT CGGAACGCCT GCTTCTCCGG GCACTCGACC GGTGCAAGGA TCTCGGGTGC
GAAACGCAGT TCCTCCGGTT AAAGGATCTT AAAATCTACG ACTGCGAAGG TAACTATTCG
GAAAACCCCG CAGACTGCAC CTATCCCTGC CAGTCCACGA TGAAGTACGA GGACGACGAG
ATGGACAAGG TGTACGCGGC GGTGCTGGAC TGCGATGTTC TCTTTCTGGC GACTCCCATC
CGCTGGAACA ACCACTCGGC CCTTGTCCAG AAGTTCATCG AACGGATGAA CTGCATCGAG
AACCAGTATT CGTGGTTCGG GAACCGGATG ATTAAAAACA AGGTGGTGAG CCTGATCATC
ATCGGGCACG TGGACGGCAT GCAGCACGTG GCAGGAAATC TCCTCAACTT CTTTGCGTGG
CTGGGCTTTC ACAGCCCCGA GGTTTCGATT GCCTCGTGGG TGGGGGAGAA TAACGAGGAC
ACGACCAAAG ACTGGGAGCA GATAGAAAAG AACCCGTACA CGCAGGAAGA CCTCGTGGAC
ATGGTCAACT CCTCGCTGCG CCTTGCCTGC AGCCTGAAAC ACCAGCCCTG A
 
Protein sequence
MPSPLVGRKI GVGTITAPDP ANVKGTRVVG ISGSSRQEPG MSKSERLLLR ALDRCKDLGC 
ETQFLRLKDL KIYDCEGNYS ENPADCTYPC QSTMKYEDDE MDKVYAAVLD CDVLFLATPI
RWNNHSALVQ KFIERMNCIE NQYSWFGNRM IKNKVVSLII IGHVDGMQHV AGNLLNFFAW
LGFHSPEVSI ASWVGENNED TTKDWEQIEK NPYTQEDLVD MVNSSLRLAC SLKHQP