| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1904 |
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| Symbol | |
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| ID | 5410861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1967452 |
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| End bp | 1968126 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640869142 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001405062 |
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| Protein GI | 154151444 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.374216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTTTCC TCAACCAGTA CGGCGTCCTT CTCGGGACTA TCTTTGTGGT GGTCTTCTCG
CTTCTGGTTT TTGGGGGGAT CACGTATGCA ATTTTTATTG CATATCCTTC TGTTGTCGCC
GGGAACCGAC GCCGGAATAT TGACGCGACC CTGCCCTACG CGATCAACTA CATCACCTCT
ATGTCCACGG CCGGTATCAC ACCGGCAGAG ATCTTCCGCC TGCTCGGGGA CAGCCCGATA
TATGGTGAAA GTTCCGTGGA GGCCCGTTAC ATAGCCCGGG AGCTCGATAT CTTCGGGCGA
GACCTTATCG ATGCCCTCCG GATCGTTTCC TCGAGTACAC CTTCCCTGCG GATGAAGGAA
TTCCTGCAGG GTGCAATGGC AAGCATATCG AGCGGGGGAA ATCTCACCGA GTATTTCCGG
ACAAAAGCTG CTCAGTATGC CCTGGAGAAC CGCCAGACCC AGAAACTCTT CCTGGATACG
CTTGCCCTGA TTTCGGAGTC CTACGTGACG GCGATGGTGG CAGGTACGCT CTTTTTGATC
ATCCTCCAGT CCATCATGTC GGTGCTGGGT GGGGATTCAA AACCGATATT TCTCTATGTC
GTTATCTACC TCATGATTCC CTTCGGTACG ATGATGTTTA TCATCATGAT CAGTTCCATG
ACCCCGGAGT CCTAA
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| Protein sequence | MLFLNQYGVL LGTIFVVVFS LLVFGGITYA IFIAYPSVVA GNRRRNIDAT LPYAINYITS
MSTAGITPAE IFRLLGDSPI YGESSVEARY IARELDIFGR DLIDALRIVS SSTPSLRMKE
FLQGAMASIS SGGNLTEYFR TKAAQYALEN RQTQKLFLDT LALISESYVT AMVAGTLFLI
ILQSIMSVLG GDSKPIFLYV VIYLMIPFGT MMFIIMISSM TPES
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