| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1903 |
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| Symbol | |
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| ID | 5410860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1966400 |
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| End bp | 1967449 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640869141 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001405061 |
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| Protein GI | 154151443 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.697256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTCA ACGATAGATT AAAGGGCATT CTTGGAAAAG AAAAAGATCC TCTCTCCCAA
GCCCCGCCAC CGCTTTCCAA AAGCGAGATG GATTCCGTGG AAAAGGAACT GAGCGATATT
TCCGGCAGGC TGGATACGGA ACGCAAGAGC CGGGAAGGGA TCGGGCGTTT TCTTAAGCAC
CCGCTCAAGG TGCTCGTGGA AAAGCCCGAG AATATCCTTA TTGTCTGCGT CCCCCTGTCA
CTTATCGTTT TTGTTGGTGG ATTTATCTCG ATGGTGAAGA TGTACGGCAT CTCCGTGCTC
TTCAACTCAA CCGTGATTGA TGATTTTGCC GTTGCGGCGG TGCTCATTTC CATCATCCCG
GTGGCAGTCC TCGATTTCCG GGAACAATCA CGGATGCGGA ACCTGGAGAC CGCACTCCCC
AACTTCTTCC GTGATCTTGC CGGCATGAAT GATTCCGGTA TGACCCTGCC AAACGCGGTC
CACCTGGTGG CAGGGGCGGA ATACGGTACC CTGTCCCCCC ATATCAGAAA ACTCGATAAC
GAGATGTCAT GGGGAGTCGG TTTTGTCGAA GCCCTGTACC GGTTTGGGAA AAGCCTGGGG
ACCCCGCTTG CCGACCGGAG TGTTGACCTG ATTGCCAAGG CAAGCAAGGC CGGCGGGGAC
ATCAGCGAAG TGCTCCGTGC GGCGGCAAAC GATACCTTTG AGGTGGTCAA TCTTGCCCAG
GAACGCCGGA ACAACATGCT GATTTACGTG ATCATCGTGA TTGTCTCATT TACCGTATTC
CTGTTTGTTA TCGCGGTGCT CGTAAGCTCT TTCCTGAGCA CCATGGCAAC CGCAGGGACG
GCCGCCCAAG TAACCGCGGC AAGCAGCAAA TTCATGGGAC GAATTGATCT CCCGGCCTAT
AAGCGCCTGT TCTCCCATGC GGCTATGATC CAAGGCTTTT TCTCTGGCCT CTGCGCCGGG
CAGATGGGCG AAGGCCGGGT CATTGCCGGG CTCAAATACT CCGCGATCAT GCTGATTGTC
GCGTGGGTCA CCTTCCGGTT CTTCATCTGA
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| Protein sequence | MAFNDRLKGI LGKEKDPLSQ APPPLSKSEM DSVEKELSDI SGRLDTERKS REGIGRFLKH
PLKVLVEKPE NILIVCVPLS LIVFVGGFIS MVKMYGISVL FNSTVIDDFA VAAVLISIIP
VAVLDFREQS RMRNLETALP NFFRDLAGMN DSGMTLPNAV HLVAGAEYGT LSPHIRKLDN
EMSWGVGFVE ALYRFGKSLG TPLADRSVDL IAKASKAGGD ISEVLRAAAN DTFEVVNLAQ
ERRNNMLIYV IIVIVSFTVF LFVIAVLVSS FLSTMATAGT AAQVTAASSK FMGRIDLPAY
KRLFSHAAMI QGFFSGLCAG QMGEGRVIAG LKYSAIMLIV AWVTFRFFI
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