| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1827 |
|---|
| Symbol | |
|---|
| ID | 5411043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 1906901 |
|---|
| End bp | 1908343 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640869064 |
|---|
| Product | carbohydrate kinase, YjeF related protein |
|---|
| Protein accession | YP_001404986 |
|---|
| Protein GI | 154151368 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGTA GCATTATGCG GCCCGACCTT TCCACCTGTG CTGAGGAGTT CACTGAGACC
GGCATCGTCA CTCACGAGCG GATGCGGGTA ATAGACGCGA ACGCCCGGGC ACTGGGGGTC
TCCGGACTCC AGCTCATGGA GAGCGCAGGG AGGGCACTTG CAGATGCCGT GCTTGAGTAC
ACGCCAAAAA ATGTGCTCGT GGTGTGTGGC CGGGGCAACA ACGGAGGCGA CGGGATGGCC
GCGGCCAGGT ACCTCCAGCA TGGGGTGGAT ACAACGGTAT GTTACTTAGA CCATGGCGAC
CGCAGCCCCT CCTGCTCCCT GCAACTCAAG GCTCTTTTGG GGTGCCGGGT CAGGCTTTCC
CCGTTTATTT CAAGCGACGA TCTGCGCTCC CTCGCCCCCC TTTTTGGCAA AGCGGATGTG
ATCGTTGATG CCCTGCTTGG GACCGGGACA GCGGGGGTAC CCCGGGAACC CCTTGCCACC
TGTATCGCTA TGGCAAACGC GTCTCAGGCA AGGATTGTCG CAGCTGATAT TCCGACATCG
GGGATGAGAG CGGACCGGAT CTGCGCCTTC CACCGTCCCA AGGTTGAAGG ATCGACAGCC
GCTGATATCG GGATCCCGAT CGAGGCGGAG ATCTGCACCG GCCCGGGAGA GATCACTCTT
CTCCCGGCCC GGCAACGGAC CCGTCACAAG GGGGATGGCG GCGAGGTGCT CATCATCGGG
GGCGGGCCGT ACCAGGGTGC ACCGTACCTT GCCGGTCTCG GGGCGCTCCG CGCCGGCGCG
GATATCGTCC GGGTGGCATC GCCTGTTTTT GAACCGGTGC CGGACCTTAT CTATGAACGC
CTGTTCGGGG ACAGGATTGG TGAGGAGCAC ACGGAACTGC TCATCGCCCT CGCGGAGCAT
GCGGATGTGG TTGTCTGCGG GAACGGCCTC GGGAAAGAGA GTCATGGGGC GGTGCTGGCG
GTGGCCCCGT ACTGTAAAAA AGTGGTCTTT GACGCGGACG CCCTCCGGCT GCCCATTCCC
CGGGCCGCAC AGGAGACGGT GTACACCCCC CATGCCGGCG AGTTTGCCCG GATCGCGGGA
AAATTCCCTC TCCCCGGTGA TGCAACCGAT GCCTGCGGCA GGGCGCGTGC GGCGCGCGCG
GCGGCAAAGA ATCTTCGCGC CACGATCCTT CTCAAGGGCC CGGTGGATGT GATCACGGAC
GGGAGCCGTA CGCGGTTCAA CCGGACCGGC GATCCGGCCA TGAGCGTGGG CGGGACCGGG
GATGTTCTGG CAGGGGTTAC GGGTGCGCTC CTCTGCCACC TACCGGCGTT TGAAGCAGCC
TGCATTGCCG CGTACGTGAC CGGGCGGGCA GGAGAGCGCG TAGCGGAAAT GCGGGGAGAA
GGGATGCTTG CTTCCGATCT CGTGAACCAT ATCCCGGAAG AACTGTTCGT GAGGCATGCG
TAA
|
|---|
| Protein sequence | MKCSIMRPDL STCAEEFTET GIVTHERMRV IDANARALGV SGLQLMESAG RALADAVLEY
TPKNVLVVCG RGNNGGDGMA AARYLQHGVD TTVCYLDHGD RSPSCSLQLK ALLGCRVRLS
PFISSDDLRS LAPLFGKADV IVDALLGTGT AGVPREPLAT CIAMANASQA RIVAADIPTS
GMRADRICAF HRPKVEGSTA ADIGIPIEAE ICTGPGEITL LPARQRTRHK GDGGEVLIIG
GGPYQGAPYL AGLGALRAGA DIVRVASPVF EPVPDLIYER LFGDRIGEEH TELLIALAEH
ADVVVCGNGL GKESHGAVLA VAPYCKKVVF DADALRLPIP RAAQETVYTP HAGEFARIAG
KFPLPGDATD ACGRARAARA AAKNLRATIL LKGPVDVITD GSRTRFNRTG DPAMSVGGTG
DVLAGVTGAL LCHLPAFEAA CIAAYVTGRA GERVAEMRGE GMLASDLVNH IPEELFVRHA
|
|---|
| |