Gene Mboo_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1725 
Symbol 
ID5411736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1806131 
End bp1807300 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content55% 
IMG OID640868960 
Producttranslation-associated GTPase 
Protein accessionYP_001404885 
Protein GI154151267 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTC TTGCGCTTGC AGGCAAACCA AACTGCGGAA AGTCCACCTT TTTTAAGGCG 
GCCACCATGG CGAACGCTGA GATCGCCAAT TACCCGTTCA CGACCATCAA TCCCAACTTC
GGCGTCGCCT ATGTACGGAC GACCTGCCCC TGTAAGGGTC TCGACCTCAC ATGCGGCCAT
TGCATTGACG GTGTGCGCTT CGTGGCGGTC AACCTGATCG ATGTTGCCGG GCTCGTTCCC
GATGCGCACA AGGGTAAAGG TTTGGGTAAC CAGTTCCTTG ACAACCTCCG GCAGGCCGAT
GCGATCCTGC ACGTGATCGA TGCAAGCGGC GGAACCGACA GCGAGGGGAA CCCTGTGGGC
GCCGGCAACC ACGACCCATC CGAAGACGTG AAGTTCCTTA CCTATGAGAT GACCATGTGG
GTTTATGGGA TCCTCGACAA GCACTGGTCC CGTCTCTCAC GGCAGGCCTC GGTCAAGACA
TTCTCTATCC ACCAGGGCAT TGCCGAGGTC TTTACGGGCC TTGGGATCAC GGCCGATGAA
GTGCGTGAGG TGGAACTCAA GCTCAAACTC GACCTTGTCC ACGCGCAGAT GGAGGAACTT
GTGCAGTTCA GCGCGGAGAT GGTAAAGATC TCAAAGCCGA TGCTTGTGGT AGGAAACAAG
ATCGATGAGA CGCCCGAACC ACTGAAAGAA AAACTTGCCG CTGAGAAAGT CGCGTTTGCA
AGCGCAGCAT CCGAACTTGC GCTCCGGAAT GCCGCGGCTG CAAAAGTGAT CAAATATCTG
CCGGGCGACA AGCAGTTCTC TGTTGCTGAT GGCATCACGC TCTCCGCCCC GCAGAAAGCG
GGCCTTGTGA AGATCGCCGA GGTCATGAAG AAGAACAATG GGACGGGTGT TCAGGACGCG
ATTAACCGGG CGGTTTTTGA ACTTCTCGAC CGGATTGTCG TATACCCGGT CGAAGACGAG
AACAAGCTCT GCAACAAGCA GGGCGACGTG CTGCCGGATG CATTTTTAAT GAAGCGTGGA
TCGACTCCGC ACGATCTCGC GTTCCAGGTT CACACTGATA TCGGCAAGGG ATTTTTGTAC
GCAATCGATG CCCGCACCAA GATGCGGATC AAGGAGACCC ATATCCTCAA GGATGGGGAT
ATTATCAAGA TCGTAAGTGC CGCGAAGTAG
 
Protein sequence
MITLALAGKP NCGKSTFFKA ATMANAEIAN YPFTTINPNF GVAYVRTTCP CKGLDLTCGH 
CIDGVRFVAV NLIDVAGLVP DAHKGKGLGN QFLDNLRQAD AILHVIDASG GTDSEGNPVG
AGNHDPSEDV KFLTYEMTMW VYGILDKHWS RLSRQASVKT FSIHQGIAEV FTGLGITADE
VREVELKLKL DLVHAQMEEL VQFSAEMVKI SKPMLVVGNK IDETPEPLKE KLAAEKVAFA
SAASELALRN AAAAKVIKYL PGDKQFSVAD GITLSAPQKA GLVKIAEVMK KNNGTGVQDA
INRAVFELLD RIVVYPVEDE NKLCNKQGDV LPDAFLMKRG STPHDLAFQV HTDIGKGFLY
AIDARTKMRI KETHILKDGD IIKIVSAAK