Gene Mboo_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1716 
Symbol 
ID5411309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1794768 
End bp1796237 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content59% 
IMG OID640868951 
Productinosine-5'-monophosphate dehydrogenase 
Protein accessionYP_001404876 
Protein GI154151258 
COG category[F] Nucleotide transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0516] IMP dehydrogenase/GMP reductase
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.626692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCAAA ACAAACTGGA TGTTCCCCTC TCTCTCACGT TCGATGATGT GCTGCTTGAA 
CCCCGCGAAT CATGGATCGA ACCGGCCGAG ACTGATACCA GGAGCCGGTT TTCCAAAAAT
ATCGGGCTCA ATATTCCGTT AGTCTCTTCC GCGATGGATA CGGTGACCGA GGCGATGATG
GCAATCGCGC TTGCCCGTGA AGGCGGGATC GGCGTGATCC ACCGGAACAT GACCGCCGAG
CATGAGGTCC AGGAAGTCAA TGTGGTCAAG CAGGCCGAGG AGCTCATCGA GCGCGACGTG
CTTTTTGTGG AGGATACGGC CACGGTTTCC GATGCCGAGA AACTGATGAA CCAGTACAGT
ATCGGTGGCC TTCCTGTTGT GGGGAAGGGG AAGATCATCG GGATTGTCTC ACGCCGGGAC
GTGCGGGCAA TCGTTTCCCG GTGCGGTGAA GAGAGCATCC GGACTATCAT GACCAAAAAG
CCGATCACGG CAAGCGAAGA CATCACGCCA GAAAAAGCGC TTGAAGTGAT GTACACAAAC
AAGGTCGAAC GGCTGCCGGT AGCCGATAAA ATCGGCCGGC TGACCGGGAT TATTACCATG
CAGGACATCC TGGAAAAGCG CCAGTACCCC AAGGCAACCC GGGACAGGAA AGGCAACCTG
CGGGTTGCTG CCGCGGTCGG GCCCTTTGAT TTTACCCGGG CAACCCTTCT TGATTCCCAT
GGTGCGGATG CGCTTGTCGT GGACTGCGCC CATGGCCATA ATATGAAAGT GGTCGAGGCA
GTCAAGAACA TCAAGGGCAG CGTAAATGCC GAGGTGATTG CAGGAAACAT CGCTACCAGT
TCCGCGGCAG AGGCCCTGCT CGACGCCGGT GTTGATGGCA TCAAGGTCGG GATCGGCCCG
GGTTCGATCT GCACAACCCG GATCGTGGCG GGAACTGGTG TCCCCCAGAT CACCGCGATT
GCGCAGGTAG CCGATGTTGC GTCCCCGGCC GGCGTACCGG TGATTGCCGA TGGCGGCGTG
CGGTATTCGG GCGACGTGGC AAAAGCGCTT GCGGCCGGCG CAGACACCGT GATGATGGGG
AGCATGTTTG CCGGCACCGA CGAAGCGCCC GGCAAGGTGA TCACTATCAA GGGCCGGCGT
TACAAGCAGT ACCGGGGCAT GGGGTCGCTT GGGGTCATGA GCTCGGGCCA GTCCAGCGAC
CGGTACTTCC AGAAGAAGGG AATCGGGGCG ACAAAGTTTG TGCCCGAAGG CGTGGAGGGC
GTGACCCCGT ATGTCGGGCC CGTGGGCGAA GTGATCTACC AGATGGTGGG GGGGCTTAAG
TCCGCTATGG GTTATTCAGG GGCATCCACG ATTGCCGAGA TGCACACCAA GGCCCGGTTT
GTCCGGATCA CAAACGCCGG CATGACCGAG AGCCATCCGC ACAATATCCT CATCACGGAC
GAGGCGCCGA ATTACCGGCT CTTCGAGTAA
 
Protein sequence
MFQNKLDVPL SLTFDDVLLE PRESWIEPAE TDTRSRFSKN IGLNIPLVSS AMDTVTEAMM 
AIALAREGGI GVIHRNMTAE HEVQEVNVVK QAEELIERDV LFVEDTATVS DAEKLMNQYS
IGGLPVVGKG KIIGIVSRRD VRAIVSRCGE ESIRTIMTKK PITASEDITP EKALEVMYTN
KVERLPVADK IGRLTGIITM QDILEKRQYP KATRDRKGNL RVAAAVGPFD FTRATLLDSH
GADALVVDCA HGHNMKVVEA VKNIKGSVNA EVIAGNIATS SAAEALLDAG VDGIKVGIGP
GSICTTRIVA GTGVPQITAI AQVADVASPA GVPVIADGGV RYSGDVAKAL AAGADTVMMG
SMFAGTDEAP GKVITIKGRR YKQYRGMGSL GVMSSGQSSD RYFQKKGIGA TKFVPEGVEG
VTPYVGPVGE VIYQMVGGLK SAMGYSGAST IAEMHTKARF VRITNAGMTE SHPHNILITD
EAPNYRLFE