| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1707 |
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| Symbol | |
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| ID | 5411300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1787624 |
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| End bp | 1788175 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640868942 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001404867 |
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| Protein GI | 154151249 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.553995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATACAG TCATGGTCAG GGCGTTTGTG GCATTCGAGA TATCAGAGGA GATGCGGGAG
CTCCTGAGAG CAGCGCAGGA TACGTTCAAA AAGAGTTCAT CACGGCTCAC ATTTGTCGAT
CCCCCGCTCA TCCATATCAC GGTCAAGTTC CTTGGCGAAG TAGACGAGCG TAAGATCCCG
CTGGTCATCA GTGCCTTAAA TACTATAAAG GCCGTGCCGT TTGCCGCAAA AGGCAGCCGG
ATCACGGTCA ACAATTTCAA AAGCCCGCAT ACAGTCTGGT GCGCAATCGA CGATGCCGGG
AAGGGCCGCG AGGTCTTTGG CGCTGTCGAA AGCGTTCTTG CGCCGCTCGG GTTTGCCCGC
GAGACCCGGG CGTTTACCCC CCATGCAACG CTCGCCCGGG TCAAAGTGGC AAACCCGGCA
CTTTTCCGGT GCCTGGAGGA AGTGAAGACC GCCCCCTGCG GCAGCTGCAT GGTTGCCGGT
CTCAAGCTTA AGAAGAGCAC GCTCACTCCC AACGGACCGG TGTACGAGGA TATTGCAGAG
GTGGCCTGGT GA
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| Protein sequence | MHTVMVRAFV AFEISEEMRE LLRAAQDTFK KSSSRLTFVD PPLIHITVKF LGEVDERKIP
LVISALNTIK AVPFAAKGSR ITVNNFKSPH TVWCAIDDAG KGREVFGAVE SVLAPLGFAR
ETRAFTPHAT LARVKVANPA LFRCLEEVKT APCGSCMVAG LKLKKSTLTP NGPVYEDIAE
VAW
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