| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1674 |
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| Symbol | rfc |
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| ID | 5411997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1748274 |
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| End bp | 1749242 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640868908 |
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| Product | replication factor C small subunit |
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| Protein accession | YP_001404834 |
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| Protein GI | 154151216 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.511307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAGT CTCACACTAT CTGGATAGAG AAGTACCGGC CGGCAAAGCT TGCCGATATA
GTCGGTCAGG ACGATATAGT AGAGCGGCTC TCATCCTATG TAAAGTCCGG GAACCTTCCC
CACCTCCTTT TCACGGGAAG TGCCGGGGTG GGAAAGACCA CCGCCGCAGT CACCCTGGCC
CGGGAATTCT TCGGGGACTC GTGGCAGATG AACTTCCGCG AGCTCAATGC CTCTGATGAA
CGGGGTATCG ATGTAGTGCG CAACCAGATC AAGGAGTTTG CCCGGACCCG GCCTGCAGGT
GATGCGGCAT TCAAGATCCT CTTTTTGGAC GAAGCCGATG CACTCACCAC CGATGCTCAG
GCAGCACTGC GCAGGACAAT GGAGAGCTAT GCCAAGACCT GCCGTTTCAT CCTCTCCTGC
AACTACTCCT CAAAGATCAT CGACCCCATC CAGAGCCGGT GCGCGATCTA CCGGTTCCGG
CCTCTCGGTC CGCAGGCAGT AAAAGAGGAG ATCACCCGGA TTGCCGCAAG GGAGCACTTA
GATGTGACAC CGGAGGCAAT GGATGCAATG GTATACATCG CTCAGGGGGA TATGCGCAAA
GCCATCAACG CCCTCCAGGG TGCAGCGATC CTCAGTGCAA CGATCGAGGC CCCGATGGTG
TACGCGATCA CGTCCAATGC CCGGCCGGAA GAGATCGGGG AGCTCTTAAC GCTCTCTCTC
TCCGGGGATT TCGATGGGGC CGAGGCGCTG CTCACCCGGC TCCTGCGCGA GCGGGGTATC
GCTCCCAACG AATTGATCAA CCAGTGTTAC CGTGCCCTCA CCAAAAGGGA TATGGACCGG
GTGCTCAAGG TGGAACTCAT CGACGCGCTT GGCGAAACGG ATTTCCGTCT CTCTGAAGGG
GCGAGCAGCG ACATCCAGAT GGAGGCGCTG ATTGCCAGGT TTGTTCTTGC CGGTACAAGG
AAGCGGTGA
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| Protein sequence | MDESHTIWIE KYRPAKLADI VGQDDIVERL SSYVKSGNLP HLLFTGSAGV GKTTAAVTLA
REFFGDSWQM NFRELNASDE RGIDVVRNQI KEFARTRPAG DAAFKILFLD EADALTTDAQ
AALRRTMESY AKTCRFILSC NYSSKIIDPI QSRCAIYRFR PLGPQAVKEE ITRIAAREHL
DVTPEAMDAM VYIAQGDMRK AINALQGAAI LSATIEAPMV YAITSNARPE EIGELLTLSL
SGDFDGAEAL LTRLLRERGI APNELINQCY RALTKRDMDR VLKVELIDAL GETDFRLSEG
ASSDIQMEAL IARFVLAGTR KR
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