Gene Mboo_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1666 
Symbol 
ID5411989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1740582 
End bp1741448 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content60% 
IMG OID640868900 
ProductGHMP kinase 
Protein accessionYP_001404826 
Protein GI154151208 
COG category[R] General function prediction only 
COG ID[COG1829] Predicted archaeal kinase (sugar kinase superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.024132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.466144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGG CATCCGTGAC AGTGTTCTGC CCCGGCCATA TCTCCGGTTA CTTCAAGAGG 
GTGGACGGAT CCAATCCGTC AACAACAGGG AGCATCGGCG CCGGTATCGT GATAAGTGAG
GGAGTGACTG CCACGGTAAA ATCTGCTGCC CGTTCCTCCG TTCTTGTGCG GAACCGGTGC
GCTGATGGGA CGATACGGGA GATCTCCCGC GAGTCCTCTC CTCTCACATA CGCACTGGAC
CAGCTGGGCG TTACGGTTGC CGTTGAAACC ATCTGCCGGC TTCCTATCAG TGCCGGTTTT
GGTCTCTCTG CCGCGGCGCT GCTTTCAACA CTTGCCGCTG CCGACCACCT GCTGGACCTC
AGGCTCGGCG CAGACGGGAT TGCAGAGCGG GCCCACGAGA CCGAGGTCCT GTTCCGGACC
GGCCTTGGTG ATGTTGCCGC CTGCCAGGGT GGCGGACGGG TGGTACGGAC CGACCCGGGC
ATCCACGGTA CGATCCTGCG GAGCTTCGAC GTTGATACTC CGGTCTGTGC AGTCAGTTTT
GGCCCGATCC GTACACCCGA TGTATTGGGA TCCCCGGCCC GGATGGCACA GGTGGCTGCT
GCATTCCCGG AAAAGCAGCC GGAAAACGTT GTGGAATTTT TTACCTGCTG CCGGGAATTC
TCGGCTGCAA GCGGGCTTGA GACCGTAGCG GTGCGACGTG TGCTCGAGGA ATGCGACCGC
CAGGGTGTTC TTGCCGCAAT GACGATGCTT GGCGATGGCG TTTTTGCCTG TGGAAAACGT
GCCAGTACGG TGCTCCGGTC GTTTGGTGAA GTATACCCCA TGGATATGGC CAAAGCCGGT
GTGCATATCG TCGAGGGTGC AGCATGA
 
Protein sequence
MTAASVTVFC PGHISGYFKR VDGSNPSTTG SIGAGIVISE GVTATVKSAA RSSVLVRNRC 
ADGTIREISR ESSPLTYALD QLGVTVAVET ICRLPISAGF GLSAAALLST LAAADHLLDL
RLGADGIAER AHETEVLFRT GLGDVAACQG GGRVVRTDPG IHGTILRSFD VDTPVCAVSF
GPIRTPDVLG SPARMAQVAA AFPEKQPENV VEFFTCCREF SAASGLETVA VRRVLEECDR
QGVLAAMTML GDGVFACGKR ASTVLRSFGE VYPMDMAKAG VHIVEGAA