Gene Mboo_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1660 
Symbol 
ID5410569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1736688 
End bp1737215 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content59% 
IMG OID640868894 
Productnitroreductase 
Protein accessionYP_001404820 
Protein GI154151202 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.283139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.036754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCCT CTGATTTCAA AAAATTTGTT TCCGGCCGGG TTTCGGTGCG CGACTTCCAG 
GAGACCGCGC TTTGTGAAGA TGAGATCTCG TATATTGTTT CCTGTGCCGG TACAGCTCCC
AGTGCCGGCA ATCTTGAAGC ATGGGATGTT GTGGTGGTGA CCGATGCCGA GGCCCGGTTT
GCGCTTGCAA AAGCGGCATT CGGGCAGGAG CATGTGGGCG CTGCCCCGGC CCTTTTTGTA
GTATGTGCCA ATTACGTGCG TTCGATGTCC CAGTACGGGG AACGGGGTAT CCTGTACGCG
GTGCAGGACG CTACGATTGC CTGCACATAC ATGATGCTTG CAGCCCATTC CCATGGCCTG
TCCTCCTGCT GGACCGGCGC ATTTGAGGAG GATGACGTGC GGGAGATCCT TGATCTTCCC
CCGCACGTGC GGCCGCTTGC GCTCCTTGCA ACCGGGTACG GCCGTGAGCC GTCCCGGCGT
GCCGGGCGCA TGGAGATCGG GGAGCACCTC CATTATGAGA CATGGTAA
 
Protein sequence
MDSSDFKKFV SGRVSVRDFQ ETALCEDEIS YIVSCAGTAP SAGNLEAWDV VVVTDAEARF 
ALAKAAFGQE HVGAAPALFV VCANYVRSMS QYGERGILYA VQDATIACTY MMLAAHSHGL
SSCWTGAFEE DDVREILDLP PHVRPLALLA TGYGREPSRR AGRMEIGEHL HYETW