| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1624 |
|---|
| Symbol | |
|---|
| ID | 5412193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 1700401 |
|---|
| End bp | 1701513 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640868858 |
|---|
| Product | glutamate--cysteine ligase, GCS2 |
|---|
| Protein accession | YP_001404784 |
|---|
| Protein GI | 154151166 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2170] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0322257 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTCG GAACAGAGCA CGAGTACTCG ATCAACGATG CGCACTTTAC AGCGCTCCCG
GTCTCCGACC AGATCATAAA GGCGATCTGC GGGCGGTTCG AGAGCGAGAT CCGGTTTGGT
GAAGTAAATC TGGGAAAAGA GCTCCAGAAG AGCGTGATCG AGTTTGTCCC GCGCACGCCG
GCCTCCGGTC CTGCAGCGCT TGAGGCCCAG ATCTTTTCCG GCATAGAAAA GTTTTACCGG
GTTTTTCCTG CCCGGTACCA CCTCCTTGGG CTGGGGATGC ACCCAACACT TACCCTTGAC
CGGGCTATTG TGTGGGACCA TGACGAGGGA GAGTACTACG AGGCCTATGA CCGGCTCTTC
AATATCCGCC AGCACGGGTG GCTCAATATC CAGGCGCTCC AGATCAATCT CTCCTATGCC
GGGGAAAAGG ACCTGCTCGT GCAGTACAAC CGGATCCGAA CCCTGCTCCC GTACCTTATC
GCGCTTTCGG CCTCCTCTCC CATGGTCGAG GGAAGGCTGA CCGGGGCCAT GGACAACCGG
CTCCTCTTTT ACCGCGAGAA CCAGAAAGAG ATCCCGGGGA TCTGCAGCGG GATCATCCCG
GCCCGGCTTT CATCTGTTGC AGAGTACAAA TCTGCGCAGG AAGTGATCTA TACAGAGCTC
CGGGAACGGG ATGCGGCAAT CCTCTGCGAG GAGTGGCTCA ATTCAAGCGG CCTTATCATC
CGGTTCTCCC GGCAGTGCCT GGAGATCAAG GCGCTTGACG AACAGGAGTG CGTCCGCTCG
GACATGGCAT TTGTGGCATT CGTCTCCTCC CTTCTCCGCT GTACAACCCT TCCGGTGGAG
AGCGACCAGG ACTCGCTCCT TGCGCTTACC GAAACAGCGA TCCGGCAGGG TACGGCCGGC
CTCTTGCCCG AACTGGAAGC GTTGTACTCT CATGCCTGGC GAAAGGCAAC AGCCGAGGAA
CGGCAGTATC TCCCGGTTAT CAAAGAGCGG ATTGCCAAAG GCAGCCTTGC CGAGCAGATC
GCAGAACGAT ACCGGAAGGA ACAGGCGATC GAGCCTGTCC TTGCAGATCT TGCGCAGTGC
CTGCGGGCAA ACCGCCCGTA CGGGGCAGAG TAA
|
|---|
| Protein sequence | MTVGTEHEYS INDAHFTALP VSDQIIKAIC GRFESEIRFG EVNLGKELQK SVIEFVPRTP
ASGPAALEAQ IFSGIEKFYR VFPARYHLLG LGMHPTLTLD RAIVWDHDEG EYYEAYDRLF
NIRQHGWLNI QALQINLSYA GEKDLLVQYN RIRTLLPYLI ALSASSPMVE GRLTGAMDNR
LLFYRENQKE IPGICSGIIP ARLSSVAEYK SAQEVIYTEL RERDAAILCE EWLNSSGLII
RFSRQCLEIK ALDEQECVRS DMAFVAFVSS LLRCTTLPVE SDQDSLLALT ETAIRQGTAG
LLPELEALYS HAWRKATAEE RQYLPVIKER IAKGSLAEQI AERYRKEQAI EPVLADLAQC
LRANRPYGAE
|
|---|
| |