| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1598 |
|---|
| Symbol | |
|---|
| ID | 5410912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1669975 |
|---|
| End bp | 1670442 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640868832 |
|---|
| Product | GtrA family protein |
|---|
| Protein accession | YP_001404758 |
|---|
| Protein GI | 154151140 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2246] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.107787 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.139272 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTCT GGGAGGGGGA CGGGCCGGTC GCATCTGTCG CCCGGCTCCT TTCCCGGGAA
AAGATCCCCG GGTTTGTCGT TATCGGCATC ATCTCGACCA TCCTTGACCT GGGTCTCCTC
TACGGCCTCA CCGAATATTT CCATATCTGG TATCTCCTGT CCGCAACAGT CTCGTACAGT
TGCGGGATGG TTCTCAATTT TCTCTTAAAC AAGTTCCTCA ATTTTCAGGA TACGAGCCGG
CATTACCTCT GGCAGTTTGT CACCTTTGCC CTGATCTCCT CGACCGGCCT TGCCCTGACA
CTCGGGGTTC TCTATATTGC AGTCGAGATC TTCTCGCAAA ACTACCTTGT CGCAAAACTC
ATCGCGATCA TTCTGTCCTT TGCCTGGAAC TATCTTGGCC AGAGCAGGAT CACGTTCTCT
TTAGGGAAAC ACCGGATCAG CGGCGACCGG AGAGATTACC TGCGATAA
|
|---|
| Protein sequence | MDVWEGDGPV ASVARLLSRE KIPGFVVIGI ISTILDLGLL YGLTEYFHIW YLLSATVSYS
CGMVLNFLLN KFLNFQDTSR HYLWQFVTFA LISSTGLALT LGVLYIAVEI FSQNYLVAKL
IAIILSFAWN YLGQSRITFS LGKHRISGDR RDYLR
|
|---|
| |