Gene Mboo_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1569 
Symbol 
ID5410094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1637086 
End bp1638024 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content57% 
IMG OID640868803 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001404729 
Protein GI154151111 
COG category[R] General function prediction only 
COG ID[COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0135813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCCA TGACCAATGT ATCACTCAAA GCCGCGGACC GCACGGAGAT CACGGTCCTT 
GTGGACAACT ATATCGATAT CTTCGTACCT CAGGCAACAC CTGTTGATCA CCGGCTCCTG
TTCGATCCCT GCCGGCACCT CATGGCAGAG CACGGTTTCT CCTGCCTTGT CCGGGTTTTT
TCCGGTAAGC AGGAGCACGC AATCCTCATG GATACCGGGC TCTCGCGGGA ATGCATGGCC
TGGAACGCAC GGCAGCTCAA AATCCCCCTT GGCGGGATCG AGGCAGTTGT TTTGAGCCAT
GGCCACTTCG ACCATATTGG GGGCCTGCCT GCCGCTGTCA GCGGTGCGGG CCGGCAGGTG
CCGCTTGTCC TCCACCCGGA TGCATTTTTG GCACGGAGGA TAAACGGCAA AAACGGCATC
GCAGAGCTGC CGGGCATAGA TGCCGTAGCG CTCAAGAAGG CCGGGGCCGA TATCCTCGGG
CGTGAAGGGC CATCCACGCT CGCCGCCGGC CGGCTGCTGG TCACAGGCGA GATAGAGAGA
ACAACCAGTT TCGAAACCGG GATGCCGGGC ATGGAGATGT TTGATAAAAG CGCATGGCTT
CCAGACCCGA TCCGGGATGA CCAGGCAATT GTCATTAAGG TAAAAGACAA AGGTCTTGTC
GTGTTGAGCG GCTGTGCCCA TGCAGGGATC GCAAACACCG TAAAATACGC GCAGAAGATC
ACCGGAACAG AAAAGGTCCA TGCAGTGCTT GGCGGGTTCC ACCTCACCGG CCCGGCCTTT
GCGCCACGGA TCCAACCGAC CGTTGCTGCA ATAAAAGAGA TCAATCCCGA TTACGTAGTA
CCGATGCACT GCACCGGCTG GGATGCGATC AACCAATTCA TGGCCGCAAT GCCGGAAAAA
TGTATCCTGA ACACAGTCGG AACGAGATAC ATATTTTAG
 
Protein sequence
MISMTNVSLK AADRTEITVL VDNYIDIFVP QATPVDHRLL FDPCRHLMAE HGFSCLVRVF 
SGKQEHAILM DTGLSRECMA WNARQLKIPL GGIEAVVLSH GHFDHIGGLP AAVSGAGRQV
PLVLHPDAFL ARRINGKNGI AELPGIDAVA LKKAGADILG REGPSTLAAG RLLVTGEIER
TTSFETGMPG MEMFDKSAWL PDPIRDDQAI VIKVKDKGLV VLSGCAHAGI ANTVKYAQKI
TGTEKVHAVL GGFHLTGPAF APRIQPTVAA IKEINPDYVV PMHCTGWDAI NQFMAAMPEK
CILNTVGTRY IF