| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1552 |
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| Symbol | |
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| ID | 5411239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1621848 |
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| End bp | 1622984 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640868786 |
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| Product | CBS domain-containing protein |
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| Protein accession | YP_001404712 |
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| Protein GI | 154151094 |
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| COG category | [K] Transcription
[R] General function prediction only |
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| COG ID | [COG1994] Zn-dependent proteases
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.651546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCT CCTATAAGAT TGGACGGCTC TTTGGCATTC CTGTTCTGAT CCATTTTTCG
TTTCTGATTG TTATCCCCCT TTTAGCGTGG ATCATCGGAA TCCAGATCGC ACTTACCACA
ACTACGATCC AGTATATTTT CCAGGTTCCC ATAGATACCA CCCTGATCAC GGCGGGATTC
ATGCCATGGA TCCTCGGCAC CATCGTCGCA CTCGGGCTTT TTTTGGGAGT TCTGGTCCAC
GAAATCGCCC ATTGCATTGT TGCCAGGAAA AAGGGTGTGA GGATCCAGAG TATCACCCTG
CTCATGTTCG GTGGTGTCTC CCGGATGGAG GAAGAAGGAG TACCGGATCC GAAAGTTGAG
CTCCCCATGG CACTGGTCGG GCCATTCACC AGCCTTCTCT TCGGTCTCGT ATGCGCCGGT
CTCGTCTACC TTGTCCCGGG AATGACCCCT TATCCCGCGA TCGCCGGCAT CCTCATTTTT
ATCTTCGGGT ACGTTGCCGT GCTTAACATC CTTCTCTTTG CATTTAACCT GATCCCGGCA
TTTCCCATGG ATGGCGGCAG GGTACTCCGG GCGGCACTGG CACAACGAAT GCCCGTCCAC
AAGGCGACCC GGATTGCTGC CAATATTGGT AAGGGGTTTG CCATTATTTT TGGCATCATC
GGCCTGTTAT TCTTCAACCC GTTCCTGATC CTTATCGCAC TTTTTGTCTA CATCGGGGCA
GGCTCGGAAG CAACCATGGA CCAGTTCACC TACCTGTTGC ACAACGTTAC GGCAGAGAGC
ACGATGAGTT CTCCGGTAAC GTCCGTGACA CCGGCCCTCT CACTTTCAAA GGTGGCAGAG
ATGATGCTTT CCACCAAGCA CCTAGGTTTC CCGGTTGTCG AACATGACAA ACTTGTAGGA
ATGATCACGC TTGTGGATGT GAACCGTATC TCACCGGCCG ATCGCGAGGC AAAGCAGGTC
CGCGACATCA TGACCCGCGA TCCGGTTACC CTTCCGCCAT CTGCACCGGT CATGGACGCC
TTAAGAATCA TGTCAGCCCG CAATATCGGG AGGATCCCCA TAGCTCAGGA CGGCAGGATC
ATCGGTATTG TCACCCGTTC CGATATCCTG AAAGTGGCCG AGCTCAAAAA GGCATGA
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| Protein sequence | MNGSYKIGRL FGIPVLIHFS FLIVIPLLAW IIGIQIALTT TTIQYIFQVP IDTTLITAGF
MPWILGTIVA LGLFLGVLVH EIAHCIVARK KGVRIQSITL LMFGGVSRME EEGVPDPKVE
LPMALVGPFT SLLFGLVCAG LVYLVPGMTP YPAIAGILIF IFGYVAVLNI LLFAFNLIPA
FPMDGGRVLR AALAQRMPVH KATRIAANIG KGFAIIFGII GLLFFNPFLI LIALFVYIGA
GSEATMDQFT YLLHNVTAES TMSSPVTSVT PALSLSKVAE MMLSTKHLGF PVVEHDKLVG
MITLVDVNRI SPADREAKQV RDIMTRDPVT LPPSAPVMDA LRIMSARNIG RIPIAQDGRI
IGIVTRSDIL KVAELKKA
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