| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1491 |
|---|
| Symbol | |
|---|
| ID | 5410411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1544678 |
|---|
| End bp | 1548229 |
|---|
| Gene Length | 3552 bp |
|---|
| Protein Length | 1183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640868726 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001404652 |
|---|
| Protein GI | 154151034 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.142763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAGTT TGAAAAAAAG TGGAGAAACT CGTTTCTCCC TTGTATTCAG TATTGCGTTG
CTCGTCCTGA TGACAGCCGT GATAATCCCC GGCGTGATGG GATCTTCAGC AAATGTGAAT
CTCGGAACGG CCGGTAATTA TGTGATTCTA TCAGAATCCG GAATCTCAAC CACAGGAACT
ACGTCAATCG TTGGAGATGT TGGCGTAAGT CCAATCAATG CGACGGCCAT AACGGGCTTT
GGCCTTGTCA TGGATCCCTC AAACCAGTTT TCAACATCGT CCCTAGTTAA TGGAAAGGTA
TATGCAGCGG ACTATGCTGG TGCTACACCG GCTACCCTGA ATGCTGCTAT AAGTGACATG
GAGGCAGCGT ATACGGATGC GCTTACCTGG TCACCCGGGG TTACCGAACT TGGCGCCGGA
AATATCGGCG GGATGACGCT CACTCCCGGT GTCTACAAAT GGAGTACTGT CGTGACTGTC
CCCACGGATG TCACCCTCGC GGGTGGCCCC AATGATGTCT GGATCTTCCA GATAGCACAG
GGGCTGGACA TCAGCTCTGG CAAGCACATT ATCCTTAGTG GCGGAGCACA GGCTAAAAAC
ATCTACTGGA TTGTAGGCAG CCAGGCGACA CTCGGTACAG GATCGGTATT CAACGGGAAT
ATCCTGAGTA AAACAGCGAC TGTTATAAAC TCCGGTGCAA CCTTAAATGG CAGGGCACTG
GCACAGACCG CGGTCACCCT GGATGCAAAC ACGGTGACCA GCCCGGCATC GGGCATGGCA
TCACCCCCCA GCAACAGCGG CTCAACAACA GCCGTAAATC TTGGAACGGC CGGCAACTTC
GTTATCCTGA CAAAAACAGG AATTTCAACT ACCGGAACCA CTTCAATTGT CGGGAACGTT
GGAGTGAGCC CGGCTGCAGC GACATACATA ACCGGGTTTG GCCTCGTCGC GGATCCCTCC
AACCAGTTTT CGACATCGTC CCTGGTTGTC GGAAAGGTAT ATGCAGCCGA CTATGCGCCG
CCAACTCCGG CTACCATGAC TACCGCGGTA AGCGACATGC AGGCAGCATA CACTGATGCA
GCCGGCCGTG CTCCCGGTGT AACAGAACTG GGCGCTGGAA ATATCGGCGG GATGACGCTC
GCCCCCGGGG TCTACAAATG GAGTACCGGC GTGACTATCC CCACCGATGT TACCCTCGCG
GGAAACTCAA ATGACGTATG GATCTTCGAG ATTGCACAAA ATCTTGATGT CAGTTCAGGT
CAGCACGTGA TCCTCAGTGG CGGTGCACAG GCAAAGAACG TCTACTGGGT GGTCGCCGGC
CAGACAACAC TTGGAACAGG ATCGGCATTC AATGGCAATA TCCTGGACCA GACGGCAATC
ATCCTGAACA CCGGTGCAAC ATTAAATGGC AGGGCACTGG CGCAGACCGC GGTTACCCTG
GACGCAAACA CAGTGACCAG CCCGGCATCG GGCATGGCAT CACCCCCCAG CAACAGCGGC
TCTGCAACAG CAGTGAACCT TGGAACAGCA GGCAGTTTTG TTATCCTGAC AAAATCAGGA
ATCTCAACCA CCGGAACTAC GACAATTATC GGGAACGTTG GGGTGAGCCC GGCTGCAGCA
ACATACATAA CCGGGTTTGG TCTCGTGGCG GATCCCTCCA ACCAGTTTTC GACATCGTCC
CTGGTTGTCG GAAAGGTATA TGCAGCTGAT TATGTGCCGC CAACTCCGGC TACCATGACT
ACCGCGGTAA GCGACATGCA GGCAGCATAC ACTGATGCAG CCGGCCGTGC TCCCGGTGTA
ACAGAACTGG GCGCTGGAAA TATCGGCGGG ATGACGCTCG CCCCCGGGGT CTACAAATGG
AGTACCGGCG TGACTATCCC CACCGATGTT ACCCTCGCGG GAAACTCAAA TGACGTATGG
ATCTTCGAGA TTGCACAAAA TCTTGATGTC AGTTCAGGTC AGCACGTGAT CCTCAGTGGC
GGTGCACAGG CAAAGAACGT CTACTGGGTG GTCGCCGGCC AGACAACACT TGGAACAGGA
TCGGCATTCA ATGGCAATAT CCTGGACCAG ACGGCAATCA TCCTGAACAC CGGTGCAACA
TTAAATGGCA GGGCACTGGC GCAGACCGCG GTTACCCTGA ATGCAAACAT AGTGAGTGAC
CCCTTAGCAA CGGTGGCTCC CACAAACGGC GGCTCTGCAA CAGCAGTGAA TCTTGGAACG
GCCGGCAACT TCGTCATCCT GACAAAATCA GGAGTCTCAA CCACCGGAAC CACATCAATT
GTCGGAAATA TTGGTGTGAG TCCAATCGCT GCAACCGGAA TGACGGGATT TGGTCTCGTC
ATGGATCCTT CGAACCAGTT TTCGACATCG TCTCTGGTTA ACGGGAAGGT ATATGCAGCC
GATTATGTGT CTCCAACTCC CGCTACTATG ACGACTGCGG TAAGCGACAT GCAGGCGGCA
TACACTGATG CAGCCGGCCG TACTCCCGAT GTAACAGAAC TGGCTGCCGG AAATATCGGC
GGGCTGACCC TCGCCCCCGG AGTCTACAAA TGGAGCACCA GCGTGACCAT CCCCACCGAT
GTCACCCTCT CAGGCAGCCA GAATAGCATC TGGATCTTCG AGATTGCACA AAATCTTGAT
GTCAGCTCTG GTCAGCATAT TGTACTTAGT GGAGGTGCAC AGGCACAGAA CGTCTACTGG
GTGGTTGCCG GTCAGACAAC TCTTGGAACA GGATCGGTAT TCAACGGCAA TATCCTGGAT
CAGACTGCAA TAGTACTGAA CACCGGTGCA ACCTTAAACG GCAGAGCACT GGCACAGACT
GCAGTTACCC TGGACGCAAA CACAGTGACC AGCCCGGCAT CGGGCATGGC ATCACCCCCC
AGCAACAGCG TCTCAACAAC TGCGGTGAAC CTTGGAACGG CGGGTAACTT CATTATCCTG
ACAAAATCAG GGATCTCAAC CACAGGAACC ACGTCAATTG TAGGGAATGT CGGTGTGAGC
CCGGCTGCAG CAACATACAT AACCGGGTTT GGACTTGTCA TGGATCCTTC GAACCAGTTT
TCAACATCGT CTCTGGTTAA CGGGAAGGTA TATGCAGCCG ACTATGTGCC GCCAACTCCG
GCCACCATGA CGAGCGCGGT AAGCGACATG GAAGCCGCAT ACACTGACGC AGCCGGCCGC
GCTCCCGATG TAACAGAACT GGGCGCAGGA AATATCGGCG GGATGACCAT AACCCCCGGA
GTCTACAAAT GGAGCACCAG CGTGACCATC CCTACAGATG TCACCCTCTC AGGCAGCCCG
AATGGCATCT GGATCTTCGA GATTGCACAA AATCTCGATA TCAGCTCTGG TCAGCACGTT
GTCCTTAGTG GCGGTGCACA GGCACAGAAC GTCTACTGGG TAGTTGGCGG CCAGACAACA
CTTGGGACAG GATCGACATT CAACGGAAAC ATCCTGGATC AGACTGCAAT TGTGGGAAAG
ACCGGCGCAG TATTACACGG TCGAGCACTG GCACAGACTG CAGTTACCCT GGACGCAAAC
ACGGTGAATT GA
|
|---|
| Protein sequence | MSSLKKSGET RFSLVFSIAL LVLMTAVIIP GVMGSSANVN LGTAGNYVIL SESGISTTGT
TSIVGDVGVS PINATAITGF GLVMDPSNQF STSSLVNGKV YAADYAGATP ATLNAAISDM
EAAYTDALTW SPGVTELGAG NIGGMTLTPG VYKWSTVVTV PTDVTLAGGP NDVWIFQIAQ
GLDISSGKHI ILSGGAQAKN IYWIVGSQAT LGTGSVFNGN ILSKTATVIN SGATLNGRAL
AQTAVTLDAN TVTSPASGMA SPPSNSGSTT AVNLGTAGNF VILTKTGIST TGTTSIVGNV
GVSPAAATYI TGFGLVADPS NQFSTSSLVV GKVYAADYAP PTPATMTTAV SDMQAAYTDA
AGRAPGVTEL GAGNIGGMTL APGVYKWSTG VTIPTDVTLA GNSNDVWIFE IAQNLDVSSG
QHVILSGGAQ AKNVYWVVAG QTTLGTGSAF NGNILDQTAI ILNTGATLNG RALAQTAVTL
DANTVTSPAS GMASPPSNSG SATAVNLGTA GSFVILTKSG ISTTGTTTII GNVGVSPAAA
TYITGFGLVA DPSNQFSTSS LVVGKVYAAD YVPPTPATMT TAVSDMQAAY TDAAGRAPGV
TELGAGNIGG MTLAPGVYKW STGVTIPTDV TLAGNSNDVW IFEIAQNLDV SSGQHVILSG
GAQAKNVYWV VAGQTTLGTG SAFNGNILDQ TAIILNTGAT LNGRALAQTA VTLNANIVSD
PLATVAPTNG GSATAVNLGT AGNFVILTKS GVSTTGTTSI VGNIGVSPIA ATGMTGFGLV
MDPSNQFSTS SLVNGKVYAA DYVSPTPATM TTAVSDMQAA YTDAAGRTPD VTELAAGNIG
GLTLAPGVYK WSTSVTIPTD VTLSGSQNSI WIFEIAQNLD VSSGQHIVLS GGAQAQNVYW
VVAGQTTLGT GSVFNGNILD QTAIVLNTGA TLNGRALAQT AVTLDANTVT SPASGMASPP
SNSVSTTAVN LGTAGNFIIL TKSGISTTGT TSIVGNVGVS PAAATYITGF GLVMDPSNQF
STSSLVNGKV YAADYVPPTP ATMTSAVSDM EAAYTDAAGR APDVTELGAG NIGGMTITPG
VYKWSTSVTI PTDVTLSGSP NGIWIFEIAQ NLDISSGQHV VLSGGAQAQN VYWVVGGQTT
LGTGSTFNGN ILDQTAIVGK TGAVLHGRAL AQTAVTLDAN TVN
|
|---|
| |