| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1458 |
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| Symbol | |
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| ID | 5411403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1495866 |
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| End bp | 1497035 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640868693 |
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| Product | proteasome-activating nucleotidase |
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| Protein accession | YP_001404619 |
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| Protein GI | 154151001 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.264354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGTA TGGAAGAGAC TGCGGTGGAC AATGCCCCGC CCTCAAACGA GCTCAAATAC
CAGATCCAGA TAAACGAGCT TGAGGCGGCG CTTCTGGAAC AGAAGGTCAG AGCCGAAGAT
CTCCAGAAAG AAAATGCGCA GCTGAAACGC GAGAACAACC AGCTCAAGCG CATGCCGCTC
TTTGTAGCGG TGATCATCGA TATTCTGGAG AACAACGAGA TCTATCTCCG CCAGCAGGGA
AACAACCAGG AGTACCTGAC CCATGCCTCG GATGAGCTCA GGCCCCTGTT AAAGCCCGGC
ACCAAGGTGG CAGTCAACAA CGCACTCTCG ATTGTCAAGG TGATCGGGAA CGTTTACGAC
TCCCGGGTAC GGGTGATGGA GCTCGAGGAG TCCCCATCGA TATCCTATAC GCAGATCGGG
GGACTTACTG ACGAGATAAA AGAAGTACGG GAAGCAGTGG AGTACCCGCT CACCAAGCCC
GAGATCTTCC GGCGGATAGG AGTGGAACCA CCCAAGGGGA TCCTGCTCTA CGGTTCACCC
GGGACCGGAA AGACCCTGAT CGCAAAGGCG GTCGCCCACG AAGCAAAGGC AACATTCATC
CGCATGTCGG GAAGCGAACT GGTCCACAAG TTTATCGGCG AAGGAGCCGG GCTTGTCCGT
GAGCTCTTCA CCCTTGCCCG GGAGCGGGCA CCCGCGATTG TCTTTATCGA CGAAATCGAT
GCTGTGGGTT CCATGCGCAC CAATGATGGC ACAAGCGGCA GCGCCGAGGT GCAGCGCACG
CTCATGCAGC TCCTTGCCGA GATGGACGGA TTTGATAACC GGGGCGAGAT CCGGATCATG
GCTGCCACCA ACCGTGTTGA CATGCTTGAC CCGGCACTCC TGCGGCCCGG CCGGTTCGAC
CGGCTCATCG AGATCCCGCT TCCCGATCGT AATGCACGCC TTGAGATCCT GAAGATCCAC
TCAAAAAAGA TGCACCTTAA CGATGTCAGG CTCGATATGA TCGCCTCTAT GACTGACGGG
GCTACCGGAG CTGAACTCCA GGCAGTCTGC CGCGAAGCCG GCATGATGGC AGTCCGCCGT
GATGCTTCCG CAATAGAGAT GAAGGATTTT ACTGATGCAG TCAGGAAAGT CAGGACCGAG
ACTATCACCG ATACCCGGAT GTATACATAA
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| Protein sequence | MSSMEETAVD NAPPSNELKY QIQINELEAA LLEQKVRAED LQKENAQLKR ENNQLKRMPL
FVAVIIDILE NNEIYLRQQG NNQEYLTHAS DELRPLLKPG TKVAVNNALS IVKVIGNVYD
SRVRVMELEE SPSISYTQIG GLTDEIKEVR EAVEYPLTKP EIFRRIGVEP PKGILLYGSP
GTGKTLIAKA VAHEAKATFI RMSGSELVHK FIGEGAGLVR ELFTLARERA PAIVFIDEID
AVGSMRTNDG TSGSAEVQRT LMQLLAEMDG FDNRGEIRIM AATNRVDMLD PALLRPGRFD
RLIEIPLPDR NARLEILKIH SKKMHLNDVR LDMIASMTDG ATGAELQAVC REAGMMAVRR
DASAIEMKDF TDAVRKVRTE TITDTRMYT
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