| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1442 |
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| Symbol | |
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| ID | 5411565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1477498 |
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| End bp | 1478988 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640868677 |
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| Product | isopropylmalate/citramalate/homocitrate synthase |
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| Protein accession | YP_001404603 |
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| Protein GI | 154150985 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02090] isopropylmalate/citramalate/homocitrate synthases
[TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.323978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00218573 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGTGTTT TATTCGCCAG TAAACTGCGC TTTTTTGATA CCACGTTACG GGACGGGGAA
CAGACCCCGG GTGTATCGTT AAACCCGGAC CAGAAGTTGG AGATTGCGAC CAGGCTTGCA
GCCATTGGTG TCGATGTGGT CGAAGCGGGT TCAGCTGCAG CATCAGCTGG AGAGCAGGAC
GCGATCAGGC TTATCTCGGA TGCCGGGCTT CCCGTGGAGA CCTGCACCTT TGTCCGGGCG
GTAACGTCAG ATATTGACTA TGCCGCGGAC AATGGCGCCG ATTCCGTGCA TCTTGTGATC
CCGGTCAGTG ACCTGCATAT TGAGAAAAAG CTGCGGAAGA CCCGCGTGCA GGTAACGGAT
ATGGCGTGGA GCTCGGTGGA GTACGCGAAA AGCCGGGGGC TTATCGTAGA ACTCTCGGGT
GAGGACGCCT CACGCGCCGA CCTGGCCTTT CTTAAGGAGA TCTACTCCGG GGGGGTGGAA
CGCGGGGCCG ACCGGCTCTG TTTCTGCGAC ACGGTTGGCC TTCTCACCCC GGAAAAGATT
GCGGCATATA TCCCGCCGCT TGCCGGGATT GCACCGCTCT CCATCCACTG CCACGATGAT
CTGGGCTTCG CACTTGCCAA TACGGTGGCG GCATTAAAGG CCGGGGCCGC CTGTGCCCAT
ACGACAGTAA ACGGCCTGGG AGAGCGGGCG GGGAACACAC CTTTTGAGGA ACTCGTAATG
GCTCTGGAGG TGCTGTACGG GTACCACACG GGAATAAAAA AAGAGGAGAT CTATTCCCTC
TCTACGCTTG TTTCCCGCCT TACCGGAGTC CCGCTGCCGG TCAACAAGGC TGTTGTGGGA
GAGATGGCGT TCACCCACGA GAGTGGCATC CACGCCCATG GCGTGATCCG CGAGCCGGCC
ACCTACGAGT CCATCCGTCC CGAGCAGATC GGGAGGAAAC GCCGGATCGT GCTCGGGAAG
CATTCCGGTT CTGCCTCTGT GGAAGCAGCA CTCCATGAGA TGAAGTACGC ACCCAACGAA
CAACAGCTCA AAGCTATCGT AGCAAGGATC AAGGATCTCG GCGATTCCGG CAAACGTGTG
AGCGACGCAG ACTTAATGGC CGTTGCCGAT ACGGTGCTTG CCATGGAGTG CAAACCCACC
ATCAAACTGC GGCAGTTCAC CGTGGTCTCT GGGAGCAGCA TGATCCCGAC TGCATCGGTC
ACTCTTGAAG TGAAAGGAAA GGAGATGACC GGTGCCGCTA CAGGTGACGG GCCAGTGGAT
GCCGCCATGC AGGTACTCGC CAAATCAGTG GCCGATGTGG CTGACATCCG GCTCGAAGAG
TACCATGTGG ATGCGATCAG CGGCGGCACC GATGCGCTGG TCGAAGTGAC CGTAAGGTTA
AGTAAAGACG GGAAGATAAT TACTTCACGC GGTGCACGCA CCGATATTAT CATGGCGAGC
GTCGAGGCGA TGATCGCCGG GATGAACAGA CTACTCGAGG AACGAACATG A
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| Protein sequence | MSVLFASKLR FFDTTLRDGE QTPGVSLNPD QKLEIATRLA AIGVDVVEAG SAAASAGEQD
AIRLISDAGL PVETCTFVRA VTSDIDYAAD NGADSVHLVI PVSDLHIEKK LRKTRVQVTD
MAWSSVEYAK SRGLIVELSG EDASRADLAF LKEIYSGGVE RGADRLCFCD TVGLLTPEKI
AAYIPPLAGI APLSIHCHDD LGFALANTVA ALKAGAACAH TTVNGLGERA GNTPFEELVM
ALEVLYGYHT GIKKEEIYSL STLVSRLTGV PLPVNKAVVG EMAFTHESGI HAHGVIREPA
TYESIRPEQI GRKRRIVLGK HSGSASVEAA LHEMKYAPNE QQLKAIVARI KDLGDSGKRV
SDADLMAVAD TVLAMECKPT IKLRQFTVVS GSSMIPTASV TLEVKGKEMT GAATGDGPVD
AAMQVLAKSV ADVADIRLEE YHVDAISGGT DALVEVTVRL SKDGKIITSR GARTDIIMAS
VEAMIAGMNR LLEERT
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