| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1440 |
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| Symbol | |
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| ID | 5411563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1474895 |
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| End bp | 1476277 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640868675 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001404601 |
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| Protein GI | 154150983 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.094364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00229761 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTTGCC TCATAAAAAA GAAGAAAACT GATTGCGGAA GATCCCTTGC GTTTGCCGGA
TACGGCCTTC TTACGGGATG CATCTTTCTG CTGGGTCTCC TTTGCCTGAT CCTGCCGGTG
GCAGCAGAAA CCTACACAAC CGTCCCGGTT GCCTCCTTTA CTGCCTCGCC AGCATCGGGT
ACCGCACCGC TTACGGTTAC TTTTACCGAT GCTTCCGCGA ATGCGACCTC GTGGAGCTGG
AGTTTTGGTG ACGGGAATAC AAGTACCACG GAAAACCCAT CGTGGACGTA CACCTCAGCA
GGAACCTACA CCGCGACACT TACCTCCACC AACTCCTTCG GGAGCAACTC AACTACCAAA
ACCATAACCG TGAAAAGCGC AGTGACTACT CCGGTCTCCT CCTTTTCTGC ATCCGCGACA
TCGGGTACCG CACCGCTTAC GGTCACTTTC ACCGATACCT CTACGAACTC TCCTACGTCA
TGGAGCTGGA TCTTCGGTGA CGGAAATACG AGTACCTCGG AAAGTCCGTC GTGGACATAT
ACCTCGGCAG GGACATATAC CGTGTACCTG ACCGCAGGGA ATTCAGCAGG ACAGTCAACA
AGTTACAAGG TCATTACGGT GAGCTCGGCG ACAACCACTC CGGTAGCAAG TTTCACCTCA
AATGTTACCT CGGGAGTGCT TCCGTTCGCG GTCCAGTTCA ACGACACATC GACCAACACG
CCGACCTCGT GGAGCTGGGT CTTTGGCGAT GGGTATACCA GTACCACCGA GAATCCGGTA
CATACGTATA CTTCCGCAGG GACCTACACG GTTTACCTCA CGGCAGCAAA TTCTGCGGGA
AGCAACGTCA CCTATGTGTC GGATTACATC ACAGTGACTG CAAACGCAAC ACCCGTAGCG
AGTTTTTCCA GTAATGTCTC ATCAGGAACT GTGCCGTTTG CAGTCCAGTT TAATGACACG
TCAACCAACA CACCGACCTC GTGGTACTGG GAGTTTGGTG ACGGGTACGT AAGCTCTGTT
GAGAATCCGG TTCATACCTA CTCGGTATCC GGAGTGTATA CGGTCACCTT TACCGCCACG
AATGGTGAGG GGAGCAATGT GACCACAGAA GAAGATTATA TTACTGCAAG TTCAGCGGCA
ATATCTTCGA CATATGTTGC CACTCCCCTG CCAACTTCTG CCGTCACCCC GCTGTTTACC
GCTGCCCCGA CCTACGCGAT CACTACCTCT GCCACAACCA CTTCATCAGT TGATGACTGG
CTTGCAAAGC AGAACGCCAT CATCACCACA GCCACGACAA AAAAAGCTCC GGGATATGAT
TTCCCTGTTG CCCTTGCCGG ATTCGCGGTG GTTGCAGGGA TAGTGGTATT CAGGAGGCAG
TAA
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| Protein sequence | MICLIKKKKT DCGRSLAFAG YGLLTGCIFL LGLLCLILPV AAETYTTVPV ASFTASPASG
TAPLTVTFTD ASANATSWSW SFGDGNTSTT ENPSWTYTSA GTYTATLTST NSFGSNSTTK
TITVKSAVTT PVSSFSASAT SGTAPLTVTF TDTSTNSPTS WSWIFGDGNT STSESPSWTY
TSAGTYTVYL TAGNSAGQST SYKVITVSSA TTTPVASFTS NVTSGVLPFA VQFNDTSTNT
PTSWSWVFGD GYTSTTENPV HTYTSAGTYT VYLTAANSAG SNVTYVSDYI TVTANATPVA
SFSSNVSSGT VPFAVQFNDT STNTPTSWYW EFGDGYVSSV ENPVHTYSVS GVYTVTFTAT
NGEGSNVTTE EDYITASSAA ISSTYVATPL PTSAVTPLFT AAPTYAITTS ATTTSSVDDW
LAKQNAIITT ATTKKAPGYD FPVALAGFAV VAGIVVFRRQ
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