Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1427 |
Symbol | |
ID | 5410744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1462733 |
End bp | 1463347 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640868662 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001404588 |
Protein GI | 154150970 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.286714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000126282 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAAAG TCAATAAACA ATACCGGGAG GATGCAAAGG AAAGGATCAT CGCCGCGGCC ATCGAAGTCG CCGGTGAGAA CGGCTGGGAT GCCGTGACAC TCGATGCAAT TGCCCAGAAA GTCGGCGTCA CGATTCCTGC GCTCTACCAT TATTACAAGA ACTGCGATGC ATTGCTTGAC GAAGTGATCC TCAAAGTTGC CCATGTTACG CAGCTCCATC TTGAAGCAGG CGTGGCCCAC GAAGATGATA TTCATCAGAT TATCCGGGAT ATCGCCGATC TGACCTTTAA CCAGAAGAAA TACTACGGAC CTGCCTTCAT CCAGCTTCTC GCCCAGTTAT CCCAGCATCC AAAACAACGA AAAAAAATAG CCAGGATCTT CAAAATCCAC AGCATCATAC TCCGCGACGC ACTGATCCGG GCAAAAGCCA AAGGAGATCT TCTTCCCCGG GTAGATCCTG ATGAGGCCGT GCGGATGATC TTTGCGATCT CTATGGGTAT TTCGCTTGGC TCAATTATGA TGGAAGAGGA AGATACCGAA GGAGACAAGA GGATCTGGAT CAATGCAGTG GAACGGTGCC TCCTGATCGC CGGAAATGCC GCAGGCAGAT CGTGA
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Protein sequence | MAKVNKQYRE DAKERIIAAA IEVAGENGWD AVTLDAIAQK VGVTIPALYH YYKNCDALLD EVILKVAHVT QLHLEAGVAH EDDIHQIIRD IADLTFNQKK YYGPAFIQLL AQLSQHPKQR KKIARIFKIH SIILRDALIR AKAKGDLLPR VDPDEAVRMI FAISMGISLG SIMMEEEDTE GDKRIWINAV ERCLLIAGNA AGRS
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