Gene Mboo_1415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1415 
Symbol 
ID5412017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1443852 
End bp1444673 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content58% 
IMG OID640868649 
Producttriphosphoribosyl-dephospho-CoA protein 
Protein accessionYP_001404576 
Protein GI154150958 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1767] Triphosphoribosyl-dephospho-CoA synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.231859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.121023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCC ATCTCCTGAC TCCCGCTGAA CGTGCGCAGC TTGCCATGAT GCTTGAGGTC 
TGCGCGTTCC CCAAACCCGG TAACGTGGAC CGGTGCCACG ATTACCCCGA TACCCGGCTC
GAACATTTTC TTGCATCTGT GATTCTCGCC CGCCCGGCGC TTGAAGAAGC CGCGTCCGGC
AGGGGACGGA TTGGCGAGAT CATTGGTCAT GCGGTCCGGC AGACCAATGT CCATTCGGGG
GGAAACACGC ATTTTGGGGC GTTCCTCCTC CTTGTCCCTC TCCTGTACGG TGGCGATATC
GCGGGGGGAA ATGCAGCTGT CACCAGGACC GATATCTCTG ATGCCGTGGC GTTCTACAAG
GCCTTTGCCC TTACCCGGGT CCGGATGAAC GATACGGATG AGCTCGATGT AAATGATCCG
CGGGCCCTTG ACGAGCTCCG TGAGCGTAAT ATGTCCCTGC TCGATGTGAT GCAGCACTCT
GCGCCCCACG ACATGGTGGC CCGGGAGTGG ATCAACGGCT TTGCCCTTAC CCGGCGCGGG
GCCGACATCC TCCGCCAGAT AGGGCCGGGC CGGGAAGCAA TTGTCGAGAT GTTCTTAACT
CTCCTTGCCA CCGAGCCGGA CACGTTTATC ATCAAGAAGC ACGGCCGGTC AGTTGCGGAG
CAGACTATGG AGAATGCCCG GCAGGTGCTG GACAAAAAAA AAGTGCTCGA AACCTTTGAT
GCCGAATGTA TTAAAGCCGG CATCAACCCG GGTTCGATTG CCGATATCAC GATTGCGGCG
ATCTTTATTG CCCTTGGCGA GGGATGGGAA TGGGACTCTT GA
 
Protein sequence
MTSHLLTPAE RAQLAMMLEV CAFPKPGNVD RCHDYPDTRL EHFLASVILA RPALEEAASG 
RGRIGEIIGH AVRQTNVHSG GNTHFGAFLL LVPLLYGGDI AGGNAAVTRT DISDAVAFYK
AFALTRVRMN DTDELDVNDP RALDELRERN MSLLDVMQHS APHDMVAREW INGFALTRRG
ADILRQIGPG REAIVEMFLT LLATEPDTFI IKKHGRSVAE QTMENARQVL DKKKVLETFD
AECIKAGINP GSIADITIAA IFIALGEGWE WDS