Gene Mboo_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1394 
Symbol 
ID5410956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1427015 
End bp1427572 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content55% 
IMG OID640868627 
Producthypothetical protein 
Protein accessionYP_001404555 
Protein GI154150937 
COG category[S] Function unknown 
COG ID[COG1992] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.361977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.191695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTC CGGATCGACA GAGAGATGAG GTCCTTGCAG AGCTTTCCAA AGCCACTGCA 
TCTCTAGGGG GTACGATGGC TTCGGTGCTG GCAGTTAAAG GGATAACCAA CATCGGGTAT
GCGATCCGGG GGGCCCGGGA CAGTGCCGGT GTTGCCGCAG TGACAGGAGG ATTTGAGGTT
CAGGGCGATA CGGTCAGGGC AGCGGGAGCA TGCACATTTG ATGCTGATGC TGCTCTTGCA
GCAATTATCC TTACTGCCTC AAAATTTGAT CCGGTGATGC GCTCGGCCGC TACGATCCGA
TTCACTGACG AGGCAGGCCA GATCCTTGAA GGCATGTTCC TTGAATGCTG CACCGTTGAC
CGGCGCGGGA AACCCCCGGG AATCGGTACC ATGGACTGGG GAATCGCATC CTGCTGCAAA
GAGGGGGTGC CGGAAGCAAT TATCGACCGC GGGAATCCTG ACCATCTCCC CCGGATTCAC
CTGTTCGGCG AAAAACCCGG AGATGTTGCA GCCAATATTA TTATGTTGTC GAACCGCATT
ATACCTATAG AACTTTGA
 
Protein sequence
MTSPDRQRDE VLAELSKATA SLGGTMASVL AVKGITNIGY AIRGARDSAG VAAVTGGFEV 
QGDTVRAAGA CTFDADAALA AIILTASKFD PVMRSAATIR FTDEAGQILE GMFLECCTVD
RRGKPPGIGT MDWGIASCCK EGVPEAIIDR GNPDHLPRIH LFGEKPGDVA ANIIMLSNRI
IPIEL