| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1383 |
|---|
| Symbol | |
|---|
| ID | 5412033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1415453 |
|---|
| End bp | 1416301 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640868616 |
|---|
| Product | signal transduction protein |
|---|
| Protein accession | YP_001404544 |
|---|
| Protein GI | 154150926 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.56563 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGTTA AAGACTACAT GACGTCCGAT GTCGTCCATG TCGATATCCC CGGCAACCGC
GACGATGTTC TCAAGATCCT CAAACGCACC GGCATCTCAG GAGTACCCGT TCTCAAGAAC
AAGAAGCTGG TCGGCATCAT CACCCGTAAG GATCTCCTGC GAAAACCCGA GGAAACCCAG
CTCGGCCTCC TCATGACCTC AAAGCCGATA ACCATCGGCC CTGATGCAGA TATCCGGGAG
GCGGCCCGGC TGCTGGTTTC CCACCGGATC CGAAGGTTAC CGGTGGTAGA GGACAACAAG
CTGATCGGCC TGATCTCAGT TGCCGACCTC ATCCACGCGA TTGCCCAGAT GAAGATAAAA
GATGAGATCA AAGATCTCTA TACAAGTACA ACCTTTGCAC TCTGGGAAGA CACCCCGCTC
CCGCTTGTAG GAAGGGTCAT GGAGATCTCC GGTGTGGACG CAATCCCGAT CCTCAATTCT
GACAGTGTCC TCCAGGGCAT CATCTCAGAA CGTGACCTGA TCCGGCACTC GTCAATCGAA
GACTCTGTCG GCGTTTCCGA CTTCTCGAAC GGTACAGATG ATGACGAGTG GACCTGGGAG
AGCATCCGCG ACAACCACTC CATCAGTTTT GGCATCTCCC GGGTGCAGCT GCCCAACCGG
CCGGTGAAAC TGGCCATGGT AAAGAATGTC GTGGCAGTTC CCAAGAACTC CGAAGTGAGC
GAATGTGCGC TCAAGATGCG GAGATCGCGG GTCGACCAGC TCCCGGTGGT CAACGGGGAT
AAAAGGCTGT CAGCCATGCT CTTTGACCGG GAACTTATCC GGGCCCTCTG CAAAGAGGAT
ACGGAATAA
|
|---|
| Protein sequence | MLVKDYMTSD VVHVDIPGNR DDVLKILKRT GISGVPVLKN KKLVGIITRK DLLRKPEETQ
LGLLMTSKPI TIGPDADIRE AARLLVSHRI RRLPVVEDNK LIGLISVADL IHAIAQMKIK
DEIKDLYTST TFALWEDTPL PLVGRVMEIS GVDAIPILNS DSVLQGIISE RDLIRHSSIE
DSVGVSDFSN GTDDDEWTWE SIRDNHSISF GISRVQLPNR PVKLAMVKNV VAVPKNSEVS
ECALKMRRSR VDQLPVVNGD KRLSAMLFDR ELIRALCKED TE
|
|---|
| |