Gene Mboo_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1343 
Symbol 
ID5410279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1370729 
End bp1371463 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content49% 
IMG OID640868575 
Productflagellar accessory protein FlaH 
Protein accessionYP_001404504 
Protein GI154150886 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2874] Predicted ATPases involved in biogenesis of archaeal flagella 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0124869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.27777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTGG AACTTTCTGA CCTGATGGGG GGAGAGGACC GGCAGATTAT CTCGACCGGC 
AATAACGAGC TGGACAAGAA GATTGCAGAC GGGCTCCCGG TGGGATCCCT GACCCTGATC
GAAGGGGAGA ACGATACAGG AAAGAGTGTC CTTACCCAGC AGATTGTATG GGGGGCAATG
AAACAGGGCA TGTCGGTTGA CCTTTTCACC ACTGAGAACA CAAGCAAAAG TTTTATTAAG
CAGATGGAAT CGATGAGCCT TGACATATCA GATTATTTCG CATGGGGATA TCTCAAAGTC
TTTCCTCTCC ACGTTGTGGG TTTCGAGTGG AAAAAAGAAG AGATGGAAGG GATCCTTGCC
CGGCTGATCA CCTATATCAA AAACAGCCCT TCTCAGGTTG CTATCGTTGA TTCGTTGACG
CTTTTTACGG AATACGCTGA GACCGATACC ATTCTCACCT TCTTTACCAA CTGCAAATCC
CTTGTAGACC ATGGCAAGAC CATCCTTGTC ACGCTCCATA CCTATGCATT TGAGGAAGAT
ACCCTGGTGC GCATCCGTTC GATCTGCGAT GCCCACTTGA ACATGAAAAA GGCACTCGTG
GGGGATAAGT ACGTGATGGT CATGGAAGTG GTCAAGGTAC GCGGTGCCCG AAAGACTACC
GGAAACCTTG TCAGTTTCGA AGTACATCCG GGGTACGGAA TGAAGGTTAT CCCGATGAGT
TTTGCGAGGA TCTGA
 
Protein sequence
MAVELSDLMG GEDRQIISTG NNELDKKIAD GLPVGSLTLI EGENDTGKSV LTQQIVWGAM 
KQGMSVDLFT TENTSKSFIK QMESMSLDIS DYFAWGYLKV FPLHVVGFEW KKEEMEGILA
RLITYIKNSP SQVAIVDSLT LFTEYAETDT ILTFFTNCKS LVDHGKTILV TLHTYAFEED
TLVRIRSICD AHLNMKKALV GDKYVMVMEV VKVRGARKTT GNLVSFEVHP GYGMKVIPMS
FARI