Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1313 |
Symbol | |
ID | 5411958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1338102 |
End bp | 1339550 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640868545 |
Product | 7-cyano-7-deazaguanine tRNA-ribosyltransferase |
Protein accession | YP_001404474 |
Protein GI | 154150856 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00432] tRNA-guanine transglycosylase, archaeosine-15-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.258751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGATCA CCTTCGAAAG TCTGGACAGC GATATTGCAG GACGCACTGG CAAACTGGGC GCGGGAAAAC GGATCATAAA GACCCCCGCG CTGCTGCCGG TCATCAATCC CCACCTGATG CTGGTCACCC CCAAAGAGCT CCGAGCCATG GGAGTCGAGG CCCTGATCAC CAATGCCTAT ATCTTTTCCC AGAGCCGGCA ATATAGCGAG CGGGTAAAGG AAGAAGGTCT GCACAAACTC CTTGACTTTG ATGGGCTGAT CATGACCGAC TCCGGCTCGT TCCAGCTCTC GGTGTACGGC CAGGTTTCAT TCACGAATAA ACAGACCCTC TCCTACCAGC GGGATATCGG AAGCGACATC TGGGTGCCGC TCGATATTCC CACCTCCCCG GATGCGGACA GGCCAACAAC AGAACGGGAG CTTGCGATCA CTATGGAGCG CCTTCGCGAG GCAAAGGAAC TCTTCGGGAA CGATGCCCCG CTGGCCGGGC CGGTGCAGGG CGGGATCTTC CCGGACCTCC GCGAGCGGGC AGGAAAGGAG GTCGGGGATC TTGGCTTTTC CTTCTGTCCC ATCGGCGCAG TAGTTCCCCT CATGGAATCC TACCGGTACC GGGAACTTGT TGACGTGGTA ATGGCAGCAA AGAGCACCAT TCCCCGCTCC GCGTGTGTTC ACCTCTTCGG GGCCGGTCAC CCGGCCATGT TTGCACTCGC CGCTGCAATG GGATGCGACC TATTCGATTC CGCCGCGTAC GCGCTTTATG CCAAGGATGG ACGGTACCTC ACCACCCACG GGAGCTTCAG GATAGACGAA CTCACCGATC TTCCCTGCGC ATGTGCAGTC TGCCGGAGCC ATACAGCCGA GGAACTCTGC ACAGCAAAGG ACCGGACACG CCTTCTGGCC CTCCACAACC TGGCAGTCAC CCTTGCCGAG ATCTCGCGGA TCCGGCAGGC AATAGCTGAC GGGACGCTCT GGGAGCTTGT TGACGAGCGC TGCCGGACCC ACCCGCAGCT CCTCTCGGGA TACCGCAGGC TCCTCTCCCA CGCAGCTGAC CTCGAACTTT ATGACAGGGC CTCCAAAAGG CGGTTCTTCT ACCGGGGAGA CGAGAGCTGT GCCCGGACCG AGGTGCTCCG GTACCAGAGG CAGCTTGACC GTCTCCGCCT CGGGAAAACC GTGCTCGTGG CCTGCGATGG GAAGGAGCGC GAGGGTTATG ACGACGTCCT CTTCTTCAAG CCCCCATTTG GTCCCTACCC GCCAGCCTTA AAGGAAACTT TTCCCATTGG CCCGGCCGAG ATTCCCCCGT GGGACGAGGC CATGGTCCGG CAGGGCTGTC GTGGCATACG GATGCTTGCC GAGAGCCATA AGGAGAGCAG AATCATGGTC TCGGGCCTTC TTAACTGGGA GGAGATCTTT ACACAGGAAG CCGGCGATGC AGCGGAGCTG GTGAGATGA
|
Protein sequence | MAITFESLDS DIAGRTGKLG AGKRIIKTPA LLPVINPHLM LVTPKELRAM GVEALITNAY IFSQSRQYSE RVKEEGLHKL LDFDGLIMTD SGSFQLSVYG QVSFTNKQTL SYQRDIGSDI WVPLDIPTSP DADRPTTERE LAITMERLRE AKELFGNDAP LAGPVQGGIF PDLRERAGKE VGDLGFSFCP IGAVVPLMES YRYRELVDVV MAAKSTIPRS ACVHLFGAGH PAMFALAAAM GCDLFDSAAY ALYAKDGRYL TTHGSFRIDE LTDLPCACAV CRSHTAEELC TAKDRTRLLA LHNLAVTLAE ISRIRQAIAD GTLWELVDER CRTHPQLLSG YRRLLSHAAD LELYDRASKR RFFYRGDESC ARTEVLRYQR QLDRLRLGKT VLVACDGKER EGYDDVLFFK PPFGPYPPAL KETFPIGPAE IPPWDEAMVR QGCRGIRMLA ESHKESRIMV SGLLNWEEIF TQEAGDAAEL VR
|
| |