| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1301 |
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| Symbol | |
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| ID | 5412059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1322701 |
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| End bp | 1323729 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640868531 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_001404462 |
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| Protein GI | 154150844 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00908036 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGACGG GAAACGAGAT TGCAGAAACA CTCCGGGGGC TGGTGGACCG GGATATGACC
TTTATGCACA TCTGCGGGAC GCACGAAGCG GCAATTGCCC GCACCGGCCT GCGCAGCATC
CTACCGCCGC AGTTAAAGAT TGTCATGGGC CCCGGCTGCC CGGTCTGCAT CACGCCGCAG
GGAGAGATTG ATGCTGCCCT CGATCTCGTG GAGAAGGGCT GCATTATTGC AACCTATGGC
GACCTGCTCC GGGTACCCGG CTCGAAAGGA TCGCTTGAAT CGTGCGGGGG CGACATTCGC
GTTGTCCAGG GAATCCACAA GGCTGTAGAG ATCGCAGAAA AGACCGATAA AGAGGTGGTC
TTTATCTCGG TGGGTTTTGA GACCACCGCT CCAACCGTAG CTGCGTCAAT TCTTTCCAAT
CCCCCGAAAA ACTTCTCGAT CCTTTCCTGC CACCGTGTTG TCCCGCCGGC TATGAAGTGG
CTGCTCGAAC AGGGCGAGGC AAAACTTGAC GGGTTTATGC TCCCCGGCCA TGTCTGCGCC
GTGATGGGCT ACGATGAGTA TGAACAGTTC CCTGTCCCGC AGGTGGTTGC AGGCTTTGAG
GCCGAGGATA TCCTTCTGGG TCTGCTCATG CTCGTGGAGC AGGTCCGCGA GGGAAAGCAC
CGGGTGGATA ACGCCTACCC CCGGGTAGTC ACCCGGGAAG GAAACGCAAA AGCAAAGAAG
ATCATGTACG AGGTTTTTGA ACCATCGGAT GTTGAATGGC GGGGATTTCC GGTTATCCCG
CAGTCAGGTC TCCGGCTCAA AGAAGAATTC GGGCAGTACG ATGCGCAGAA GAAGTTTGGC
ATCGTGTACA AAAAGGTCAG CAAGCACTCG GCCTGCATCT GCGACAAGGT TTTGCGCGGG
ATTGCCGAAC CCACGGACTG TAAGCTTTTC GGCAAGGTCT GCACGCCCCG GACCCCGGTG
GGGCCCTGCA TGGTCAGCCA CGAAGGAGCC TGCAAGATCT GGCACCTGTA CCAGGTTAAA
AAGCAGTGA
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| Protein sequence | MATGNEIAET LRGLVDRDMT FMHICGTHEA AIARTGLRSI LPPQLKIVMG PGCPVCITPQ
GEIDAALDLV EKGCIIATYG DLLRVPGSKG SLESCGGDIR VVQGIHKAVE IAEKTDKEVV
FISVGFETTA PTVAASILSN PPKNFSILSC HRVVPPAMKW LLEQGEAKLD GFMLPGHVCA
VMGYDEYEQF PVPQVVAGFE AEDILLGLLM LVEQVREGKH RVDNAYPRVV TREGNAKAKK
IMYEVFEPSD VEWRGFPVIP QSGLRLKEEF GQYDAQKKFG IVYKKVSKHS ACICDKVLRG
IAEPTDCKLF GKVCTPRTPV GPCMVSHEGA CKIWHLYQVK KQ
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