| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1267 |
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| Symbol | alaS |
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| ID | 5410354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1290371 |
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| End bp | 1293115 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640868495 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001404428 |
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| Protein GI | 154150810 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.837647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.239203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAG AAGAATACCA GCTTGATTAT TTTAAGGAAC AGGGATTTAC CCGGAAGATC
TGTAAATCCT GCGGTTCTGC TTTCTGGACG CGCGACAGTT CCCGTGAGGA CTGTGGCGAT
GCTCCCTGCG TACCCTATTC CTTCATTGGC AGTCCTGTTT TTGCCCCCCA TACGGTTGAC
GAGATGCGCG AGGCATTTCT CTCTTTTTTT GAAAAGAACG GGCACACCCG TATTGAACGG
TACCCGGTAG CTGCCCGCTG GCGGGATGAT ATATATCTCA CCATTGCCTC CATTGCCGAT
TTCCAGCCGT TTGTGACCGC AGGTGTTGTC CCCCCGCCGG CAAACCCCCT TACCATCTCC
CAGCCCTGCA TCCGGTTAAA CGACCTCGAT TCCGTTGGCC GTTCGGGGCG GCACCTGACC
ACGTTCGAGA TGCTCGCCCA CCACGCGTTC AACACCCCCA CTGAAGAGAT CTACTGGAAG
GATCGCACGG TCGAACTCTG CGACCAGTTC CTTGCGTCAA TCGGGGGCGA CCTCAACAAG
GTCACCTACA AGGAGCACCC GTGGATCGGC GGCGGGAATG CAGGCCCGAG TGTTGAGGTG
ATGATCGGGG GTCTTGAGGT CGCCACCCTT GTCTTCATGA GCCTCGGGCG GCAGAAGACC
AGCCACCCCG GCTACGATCT CAACGGCGAG AAGTACTACC CGATGAAGCT CCGCATTGTC
GATACCGGCT ATGGCCTGGA AAGGCTGGTC TGGGCATCGA AGGGCTCACC AACTATCTAT
GATGCGGTCT TCCCCGACAT GGTCAGCCGG GTGATGAGTT CAGCCGGCAT CTCGCACCTT
CTGGAGAACA AGGACTACAC GAAGATCCTT GCCATGAACG CCCGGTTTGC CGGCCTCATG
GATATCTCGG GTTCCAACCT CTTTAACCTC CGAAAGAAGG TTGCGGCAGC CATCGAGATC
TCACCGGAGA AACTCGACCG GATGATTACG CCCATCGAGA AGGTGTACGC GATCGTGGAC
CACACCCGCT GCCTTGCCTA TATGCTTGGC GACTGCATTG TGCCCTCCAA TGTCCGGGAA
GGCTACCTTG CACGGCTTGT GATCCGCCGG ACCCTGAGGA TGATGAACGA GTTTAAGATG
CAGGACACGC TGGCCGATCT CATCGAAGAG CAGATGAAGA TTATTGGGAT GGACAAGTTC
CAGCAGGACA TTGCCGTGGT GCGCGAGATC GTTGACCGCG AGGTTGAAAA GTACGCCATC
ACGCTTGACC GCGGGACCCG GATTGTCCAG AAAGTGGCAA AGTCCTACAA GGCAAAGAGC
CAGCGCGTGC CGCTTGCCGA GATCATCACC CTGTATGACT CCCACGGCAT TCCCCCAGAG
ATGATCAAGG ATATTGCGGC AAAGGAGGGT GCAGTCATCG ATCTGCCGGA TAACTTCTAT
TCCCAGATCG CCGATATGCA CTCAGAATCC AAAAAGGAGG CTGCCCCGGA CAAAACCGCC
GGCTATGCAG AGCGGGTCAG CGCCCTTCCT CCCACAAAGA AACTTTACTA CGAGCAGCCG
GGTGACACCG AGTTTGAGGC AGTGGTCATT GATTTCTTTG ATGAATACGC AGTGCTTGAC
CAGACGCTCT TCTACCCGGA GGGTGGCGGC CAGCCGGCAG ATACCGGGAG CCTTGTGGGC
TCCGATAGCA TGGCCCGTGT TGATGATGTC ATAAAAGTCG GCGAAGTGAT CCTCCATCAC
ATCAGCGGGG GAGTTCTCCA GCGCGGCGAG CGGGTGAAGG GTATGATTGA TGAGGAGCGG
CGCTTCTCGC TCATGCGCCA CCATACGGCT ACCCACATCC TTCTCCATGC CGCAAAGGCG
GTGCTCGGCG TCCACATCCA CCAGTCCGGG GCGCAAAAAG GACCCGAAAG CTCACGCATC
GATATCCGGC ACTTCAAGCA TATCACTCCG GACGAACTCC GTAAGATTGA GATCGAGGCA
AACCGGATGG TAATGGCAAA CCGGCCGGTG GAGATCTCTA TTGAAAACCG AACCAAGGCC
GAGCAGGAAT ACGGCTTTGC ATTGTACCAG GGGGGTGTCC CGCCGGGCAA GGACCTTCGT
ATCGTTAAAG TGGCCGGGGA TATCGAGGCC TGCGCCGGCA CCCACTGCAG AAGTACCGGG
GAGATTGGTG CCATTAAGAT CCTCCGGGTC GAGCATATCC AGGATGGAAT AGAAAGGATA
GAGTTTGCTG CCGGGACTGC TGCTGTCTAT TACATGCAAC ACCTGGAGCA GATCGCAGCC
TCTTCCGCTG ATGTCCTCTC GGTCCAGCTT GAGAACCTCC CGCCTACCGT GACCCGGTTC
TTTTCGGAAT GGAAAGACCA GAAAAAAGAG ATCGAGCGCA TGAGCCAGCG GCTTGTCGAG
CTTGAGATCC AGGCCATCCA GCCCGAATCC ATCGGCGGAA TCCCGGTTGT GGTAAAACGC
ATTGATCTTG CCCCCCGGGA ACTTTCGTCC ATTGCTACCT CGCTTTCGGA AAAAGGCGGT
GTTGCCCTCC TTGCCACACC GGGCGAGACT GCACGGATTG TCCTCGCCTC GGGAGATGCC
CGGGTCAATG CCGGGGATAT TATCGGGCAG CTCTGCAGCC TCCTTGGCGG CAAAGGCGGC
GGAAAACCCC AGATGGCGCA GGGTGGCGGA CCAGAAGTGG ACAAGCTTGA CCTTGCCTTA
AATGTCGGGC GCGAACGTAT CATTGCCGCG CTGCAGAAGA AGTGA
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| Protein sequence | MLEEEYQLDY FKEQGFTRKI CKSCGSAFWT RDSSREDCGD APCVPYSFIG SPVFAPHTVD
EMREAFLSFF EKNGHTRIER YPVAARWRDD IYLTIASIAD FQPFVTAGVV PPPANPLTIS
QPCIRLNDLD SVGRSGRHLT TFEMLAHHAF NTPTEEIYWK DRTVELCDQF LASIGGDLNK
VTYKEHPWIG GGNAGPSVEV MIGGLEVATL VFMSLGRQKT SHPGYDLNGE KYYPMKLRIV
DTGYGLERLV WASKGSPTIY DAVFPDMVSR VMSSAGISHL LENKDYTKIL AMNARFAGLM
DISGSNLFNL RKKVAAAIEI SPEKLDRMIT PIEKVYAIVD HTRCLAYMLG DCIVPSNVRE
GYLARLVIRR TLRMMNEFKM QDTLADLIEE QMKIIGMDKF QQDIAVVREI VDREVEKYAI
TLDRGTRIVQ KVAKSYKAKS QRVPLAEIIT LYDSHGIPPE MIKDIAAKEG AVIDLPDNFY
SQIADMHSES KKEAAPDKTA GYAERVSALP PTKKLYYEQP GDTEFEAVVI DFFDEYAVLD
QTLFYPEGGG QPADTGSLVG SDSMARVDDV IKVGEVILHH ISGGVLQRGE RVKGMIDEER
RFSLMRHHTA THILLHAAKA VLGVHIHQSG AQKGPESSRI DIRHFKHITP DELRKIEIEA
NRMVMANRPV EISIENRTKA EQEYGFALYQ GGVPPGKDLR IVKVAGDIEA CAGTHCRSTG
EIGAIKILRV EHIQDGIERI EFAAGTAAVY YMQHLEQIAA SSADVLSVQL ENLPPTVTRF
FSEWKDQKKE IERMSQRLVE LEIQAIQPES IGGIPVVVKR IDLAPRELSS IATSLSEKGG
VALLATPGET ARIVLASGDA RVNAGDIIGQ LCSLLGGKGG GKPQMAQGGG PEVDKLDLAL
NVGRERIIAA LQKK
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