Gene Mboo_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1239 
Symbol 
ID5409923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1258306 
End bp1258932 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content62% 
IMG OID640868466 
Productsiroheme synthase 
Protein accessionYP_001404400 
Protein GI154150782 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCAC TTTTTGTGGA GTGTGCAGGT AAGCAGATTG TCGTGTTCGG CGGCGGGGAA 
GTGGCGGCAA GGAAGGCCGC TCACTTCTCG CAGGAGGCCG ACGTGCTGGT GGTGAGCCGG
GCGTTTACAC CCTCGGTCCG TGCCCTGCCG GTCCAGATTG AGACGCTCGA TACCCGGGAA
GCGGACGATG CAGAGCTCCT GCGGTTTATC GGGCCGGCGT TTCTGGTGAT CGGTGCGCTG
TCCGATAAGG CCGAGAACGA CCGGATCGGT GCGCTCTGCA AAGAGCATGG CGTGCTCTTC
AATAACGCTG ACGGGAAGCC GGGCGATGTG GTGATCCCGG CAATATCCGC GGGAGAGTTT
TACACGATTG CAGTGAGCAC CGCAAGCCAG AGTCCCGCGG TCTCCCGGTT TATCCGGCAG
GAGATCGAGA AGCGTTACCC GGCGCTCGAT GCGATGGTGG CACTCCAGCA CCGGCTGCGC
GAAACCCTGA AGGAGCGAAT GACCACGCCC GAGGAACGGC GCCGGATCCT CTGGGATGTG
CTCCGCGACA AGACGGTCTG GACGCTTCTT TCCGAATCGC CGGACCGGGC ATGGGAGCGG
GTGAGCGGGC GGTATCTCAA TGAGTAA
 
Protein sequence
MIPLFVECAG KQIVVFGGGE VAARKAAHFS QEADVLVVSR AFTPSVRALP VQIETLDTRE 
ADDAELLRFI GPAFLVIGAL SDKAENDRIG ALCKEHGVLF NNADGKPGDV VIPAISAGEF
YTIAVSTASQ SPAVSRFIRQ EIEKRYPALD AMVALQHRLR ETLKERMTTP EERRRILWDV
LRDKTVWTLL SESPDRAWER VSGRYLNE