Gene Mboo_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1236 
Symbol 
ID5409920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1254789 
End bp1255766 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content60% 
IMG OID640868463 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_001404397 
Protein GI154150779 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCCAA CGAGACGAAT GCGGCGGGTC CGGTCCCGCA CGATCCAGCC CCTGTTGTGC 
GAGACGACCA TAAGCAAAAA CGATCTTGTC GCCCCGCTCT TTGTTGATGA AACAGCGTCT
GCCCCGGTGC CCATCAGCTC GATGCCCGGG CAGTTCCGGT ACCCGGTCAG CGGGATCGCA
GCGGTGGTAC AGAAATTCCG GGACCGGGGT ATCCGGGCGG TTCTCCTGTT TGGGATCCCG
GCGCACAAGG ATGAGGGTGC AACCGCTGCA TACGACCCGC AGGGGGTTGT GCAGCAGGCA
GTACGAAATA TCAAGGCAGC CTGCCCCGAC ATGCTCGTGA TCACCGATGT CTGCGCCTGC
GAATACACAA GCCACGGGCA CTGCGGGATC GTGGGGGACA GCCGGTGCAG CGGGCCGGAT
CTCCTTAATG ATGAGTCGCT CCTGCTTATG AATAAAATTG CCACAAGCCA TGCCGAGGCC
GGTGCCGATA TCGTGGCCCC GTCCTGCATG CTTGACGGGA TGGTAGGATC CATTCGGGCG
GCCCTTGACA CGGCAGGGTA CGAAGAAGTC CTGATCCTCT CGTATTCCAC AAAATTTTCC
TCCGCCCTGT ACGGCCCCTT CCGCGAGGCA GCGGAATCCG GGTTCTCGTT TGGCGACCGT
ACCACCTACC AGATGAACCC GGCCAATGGC CGCGAGGCAT TTCTTGAATC ACAGCTCGAT
GCCGATGAGG GCGCCGATAT CCTGATGGTC AAACCGGCCG GCCCGTACCT GGATGTGCTC
GCAGATGTGG CAACGCTCGG CCTCCCGGTT GCCGCGTACC AGGTAAGCGG GGAGTATTCC
ATGATAAAAG CGGCAGCGGA ACGCGGCTGG ATAAAAGAGA AGGAGACCGT GCTTGAGACA
CTGACCTGCA TCAAGAGGGC CGGGGCCGAC CTCATCATCA CCTATTTTGC GTACGATGTC
TGCGGGTGGC TCTCATGA
 
Protein sequence
MFPTRRMRRV RSRTIQPLLC ETTISKNDLV APLFVDETAS APVPISSMPG QFRYPVSGIA 
AVVQKFRDRG IRAVLLFGIP AHKDEGATAA YDPQGVVQQA VRNIKAACPD MLVITDVCAC
EYTSHGHCGI VGDSRCSGPD LLNDESLLLM NKIATSHAEA GADIVAPSCM LDGMVGSIRA
ALDTAGYEEV LILSYSTKFS SALYGPFREA AESGFSFGDR TTYQMNPANG REAFLESQLD
ADEGADILMV KPAGPYLDVL ADVATLGLPV AAYQVSGEYS MIKAAAERGW IKEKETVLET
LTCIKRAGAD LIITYFAYDV CGWLS