| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1231 |
|---|
| Symbol | |
|---|
| ID | 5411910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1250264 |
|---|
| End bp | 1251364 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640868458 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001404392 |
|---|
| Protein GI | 154150774 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0108298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGAGA CTTCTTCGCC TGGCACCCTG TACAATGCCC CGGACCGGCT CAAGCTGATT
GTCCTTGCCA TCCTTGTCCT TGTTGGCGTG TTTCTTGAGG GCATTGTCCA TTATCTGTAC
CACATCTCGG CCGTGTACAC GCAGTTCTAC TACCTCATAG TGGTCGTAGT CTGCCTGTGG
TACGGCCGGG CCGCTATTGC GATTGCACTC TTCTTTGGGG CTCTCCAGAT TGCAGTAAGC
TGGCTGCTTG CGCCGGACTC CCTGCCGTAC GAGGCCATTA TCCGGGCGCT GATGCTCCTT
CTTGTGGCGA TCGTGATCTG GAAGATCGTG GAGGAGATGA CGGGATATTA CAACCGGCTC
CTTATCCAGA ATGCAGAGCT TAAGGATCTC AATGCCCGGC TGGACGCATC CCGTGAAGCA
TTCCTTACCG CAAACAAGAA ACTCAATCTT CTTTCCGGCA TTACCCGGCA CGACATAAGG
AACCAGCTGA CCGCACTCCT TGCATATATC GAACTCTCCC GGATGATCCA ACAGGATCCC
GAGATGACCG CTACCATTGA CAAGGAAGAG CTCGTGGCAA ACAACATCCT GCGCCAGATC
GAGTTTACGA AGGACTACGA AGATATCGGT GTAAAAACGC CTACATGGAA CAACGTGGCA
GAGGAGATGA GAATCCTTTT GCCGCAGCTC AAATCTGCCG GAATCGCCCT TGAGATCTCC
ACTGGCGATC TCGAAATTTA TGCTGACCCC CTGCTCGAAA AGGTTTTTGA GAATCTGGTG
GACAATTCCC TCCGTCATGG GGAGCATGTC CGGCACATTA CCGTGTCATA CCGGAAAAAT
CCTGACGGTC TGGCGCTTAT CTACCGCGAT GACGGAGTGG GTGTGGCAGC CGCAGAAAAA
GAGAAGATCT TTGATCGTGG TTTTGGGAAG AACACCGGCC TTGGACTCTT TATCTCCCGT
GAGATCCTTT CAATTACCGG CCTTTCCATC AGTGAGTGCG GGACACCCGG GACCGGGGTG
CAGTTTGAGA TCGGGGTACC GGAAGGGAGA TACCGGTTTA TCGGGAGCAC GGAATCAGTG
AATGATGGAC AGGGACGCTG A
|
|---|
| Protein sequence | MNETSSPGTL YNAPDRLKLI VLAILVLVGV FLEGIVHYLY HISAVYTQFY YLIVVVVCLW
YGRAAIAIAL FFGALQIAVS WLLAPDSLPY EAIIRALMLL LVAIVIWKIV EEMTGYYNRL
LIQNAELKDL NARLDASREA FLTANKKLNL LSGITRHDIR NQLTALLAYI ELSRMIQQDP
EMTATIDKEE LVANNILRQI EFTKDYEDIG VKTPTWNNVA EEMRILLPQL KSAGIALEIS
TGDLEIYADP LLEKVFENLV DNSLRHGEHV RHITVSYRKN PDGLALIYRD DGVGVAAAEK
EKIFDRGFGK NTGLGLFISR EILSITGLSI SECGTPGTGV QFEIGVPEGR YRFIGSTESV
NDGQGR
|
|---|
| |