Gene Mboo_1225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1225 
Symbol 
ID5411904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1245920 
End bp1246585 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content57% 
IMG OID640868452 
Productprecorrin-8X methylmutase CbiC/CobH 
Protein accessionYP_001404386 
Protein GI154150768 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2082] Precorrin isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.547545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.86502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGG AATCATCACA CCACGCGGGT ACCACCGAAA GTACGTATAT TGACCCCGGC 
GCAACCACTC CCGAGGCCTA TGAGATCTCA AAGACCTCGC GGACCCTTGC GCGGAAGATG
GTGGGGAACA AAACTCCTGA GGACCGGGTC CGGCAGCGCT GCTCGGTCGC GGTTGGCGAT
TTTGCCATGG CTGACCTGCT CAGGTTCAGT GCCGACCCGG TAGCAGCAGC GGTGGCCGCA
CTTAAAGCCC GTGCCCCGAT CATTACCGAT ATCCGCATGG TCCAGGTCGG GATCCAGAAA
AAAGGACACC ATTCTGAGGT CCTCTGCGCA CTCGATTTTG GCAGTGATAT TGCACAGGAA
CAGGGAATAA CAAGGAGTTC TGCCGGTTTT ATCGCACTCC GCGACAGGAT TGCCGGGTCC
ATTGTGGTGA TCGGGAACGC TCCGTCCGCA CTTCTCACGG TCTGCGCTAT GATCAAAGAG
GGTATCCGGC CCGCAGTTGT GATCGGTGCA CCGGTGGGTT TTGTGAATGC AGCAGAATCA
AAAGAGCTCC TGCGGACAAT TGACATCCCC GCCGTTTCCA CGGAGGGGAC ACGGGGTGGT
ACTCCTGTGG CAGTTGCAGC CATAAACGAG ATTATAACGA TCCTGATTGA GGAATCGGCT
CCATGA
 
Protein sequence
MSKESSHHAG TTESTYIDPG ATTPEAYEIS KTSRTLARKM VGNKTPEDRV RQRCSVAVGD 
FAMADLLRFS ADPVAAAVAA LKARAPIITD IRMVQVGIQK KGHHSEVLCA LDFGSDIAQE
QGITRSSAGF IALRDRIAGS IVVIGNAPSA LLTVCAMIKE GIRPAVVIGA PVGFVNAAES
KELLRTIDIP AVSTEGTRGG TPVAVAAINE IITILIEESA P