Gene Mboo_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1199 
Symbol 
ID5411347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1213856 
End bp1214431 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content52% 
IMG OID640868425 
Productsugar isomerase (SIS) 
Protein accessionYP_001404360 
Protein GI154150742 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation 
TIGRFAM ID[TIGR03127] 6-phospho 3-hexuloisomerase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.645191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0117075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGT TGATGGCATC GAAAATTCGA TCGGTTGCTA ACTCCCTTTC CGCTGATGAT 
GTCGAAGGGT TTCTTGCAGA GATTCTGAAA GCCCGGCGCA TCTATGTTAT GGGTGCCGGC
AGGTCTGGAC TTGTAGCAAA GGGATTTGCC ATGCGCCTGA TGCATCTTGG CCTCCAGTCG
TATGTTGTTG GTGAGACAAT CACGCCGGCC CTCCAGAAGG GCGATCTCAT CATTGTTTTT
TCCGGGTCGG GAAAAACAAA GACTGTCGCC GACATTGCTG AGACCGGAAA GGAGATCGGG
GCACACATCG GCCTTATCAC CTCAAACGCG GATTCGCGGA TCGGCAAAAT TGCCGATTGT
AAAGTGATCA TCGAAACCCA GCGCGATGAT GTCCGCGACG ATGCCGCGGA ATTTGAGATC
CGCCAGATGC TTGGCGACCA CAAATCGTTT GCGCCACTGG GGACGCTTTT TGAAACGGCT
TCCATGATCT TTTCCGATGC GGTGATCTCC CGGCTCATGG AGATCACCAA GACCGACGAA
TCTGCGCTCA AGAACCGGCA TGCAAATATC GAATAA
 
Protein sequence
MMLLMASKIR SVANSLSADD VEGFLAEILK ARRIYVMGAG RSGLVAKGFA MRLMHLGLQS 
YVVGETITPA LQKGDLIIVF SGSGKTKTVA DIAETGKEIG AHIGLITSNA DSRIGKIADC
KVIIETQRDD VRDDAAEFEI RQMLGDHKSF APLGTLFETA SMIFSDAVIS RLMEITKTDE
SALKNRHANI E