| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1175 |
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| Symbol | |
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| ID | 5410780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1185301 |
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| End bp | 1186026 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640868401 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001404336 |
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| Protein GI | 154150718 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.542362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.617727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAAGG AATCTTTTCA GGAGGATATT CGCACAAGAC CGGCCCGTGC GCTCCTCTTT
GACATGGACA ATACCCTTTT CGATCTGGTC GGGGCCCAGA TTGCTGCCTG CGAAAGCGTA
GTGCGCCATC TCGGTTACGA TGACGGTGAC GATCTTTTCC TGTACTTCCT TAACGGCTCC
CACGGCTTTG AATCAACGGA GAATATCCGG CAGTACATGG AGGAGCGCCG GATCCCCACA
AACGGCATGT ACGAGCAGGC CTGCCGGATC TATGCAAGCG AGAAACTCCG CAATGTCACG
CCCTACCCCG GTGTCGCAAA GACCCTTGCA GCAGTCCGGG AACGGGGCTA TACGATGGCC
CTTGTCACCG ATGCGGAACA TCCCGATGCC CGGCTCCGGC TGGACAAATG CGGGCTCACC
CGGTTTTTTG ATTGCATGGT GACGTATGAC AAAGTCGGCG TCAAGAAACC TGCGCCCGAT
CCGTTCCTTG CGGCCCTGAG AGCCGTGGAT GCGAGGCCCC ACGAGGCCCT CTTTATCGGT
GACAGCCCGC GCCGGGATAT CGAGCCCTGC AACAAGCTCG GGATCCGTAC CGTGTATGCG
CGGTACGGTG ACCGTTTCTC AAAAACCCGG GACAATATTG CGGCCGATTT CGTGATCGAC
CGCATGGACG AGCTCCTCCG GATCCTTGCG CCCATCCCCG TTGCCGGTTC CCCGCCCGGA
ACGTGA
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| Protein sequence | MSKESFQEDI RTRPARALLF DMDNTLFDLV GAQIAACESV VRHLGYDDGD DLFLYFLNGS
HGFESTENIR QYMEERRIPT NGMYEQACRI YASEKLRNVT PYPGVAKTLA AVRERGYTMA
LVTDAEHPDA RLRLDKCGLT RFFDCMVTYD KVGVKKPAPD PFLAALRAVD ARPHEALFIG
DSPRRDIEPC NKLGIRTVYA RYGDRFSKTR DNIAADFVID RMDELLRILA PIPVAGSPPG
T
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