| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1117 |
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| Symbol | |
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| ID | 5411361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1115782 |
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| End bp | 1117920 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640868343 |
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| Product | DEAD_2 domain-containing protein |
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| Protein accession | YP_001404278 |
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| Protein GI | 154150660 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.708962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGGTT TTGGGGTCCA AAGATCTCTT CCCGCAAAAA AATCGGGCCG GAGTGCAATC
CAAAAAGCAG GGTACATGTT CACTCCCCAT CCCACACCCA TAAAACATCC GGCTGCCAAT
GGTACCCCGG CAATGGACAG TTTCGATCCG TTCTTCCCCT ACAGCGAGTA CCGCCCCCAC
CAGCGCGAGA TGCTGACGTT TGCCGCACAG ATAGCGCGGG ACGGCGGCAT CGGCATGATC
GATGCCCCGA CCGGCAGCGG GAAATCAAGT GTAATCTCTG CGCTTCTCGC AGAACGCCGG
GGCCGGAAGA TCGTAATTGC GGTAAGAACG GTCAGCCAGC TCACGACCTT TGTCCGGGAG
CTTGCACTTG TCAAAAAGAA GCGGCCGGAT CTCAAGACCG TATATCTTGT CGGGAAAAAG
AGCATCTGTC CTTTAGGGGG AGAAGGAGAT ATTTACCGGC GCTGCGAAGG TGTCAAGACA
TTTTCTACAG CCCTTATGCG CGAACGGGCC GAACGCGGGG CGCTTGTCCC CATCAAGGAT
CCCTTCATCG TCCAGCAGAT ACGGAAAATG GACCGGGAGC ACCCGCTTCT CTGTCCTTAT
TTTATTGCGA GCCGCCAGTT TGTTCCCGGG GAGAGCGGCG GGGTCAAGAT GATCCCGTCT
GCCCAGGTCC GCTCGAAAGC TGACCGGATG CTCGACGACC CGGTCCGGCC CCAGGAACTC
GGGGGATTTT CTGGGGATAT CTGCCCCTAT GAGCTCGTGC TTTCGGCAGC GAAAAATGCC
GATGTGGTGA TCCTCAACTA CCACCATCTT TTTGATCGTG TAATCCGGGA GCAGCTCTAC
GCAAACCTCA ATGTGGAGGA CCAGGACGTG ATGCTCCTGA TCGACGAAGC CCATAACTGC
GGAGACGTGA TCCAATCGGT CGAAAGTATT GCGCTTGCCC AGAAAGACAT TGAGCAGGCC
ACCCGCGAGC TTTCGGGGAT GCGCCGGCTC CATAAAGGGG CAGAGGCGGT GCAGCACGTC
CTTCCCCGGC TCTCGGAGTT CATGGCCGGC CTTGCAAACT CTTCTGAGCC TGAGGACTGG
TTCGACCCCG GGATCTTCGA TCGGGCGATT GTCAAAGGCT CGCTCTGGAA GGACATGGGC
GACATTGTTG ACGAACTCAT GGGGCTTGCC GAGACCATAC GGGAAAAAAA CCAGAAGTCA
GGAGAGTTCC GCGAAACGGC AATCGAGCGC CTGACCCTTT TTATGTACCG CCTGTCCCAG
TCAGCGAATA ACCCGGCCTA TCTGACCATC TACAAACGGA CTGATGAAGG CATCCTCCTT
GAAGTCAGGA ATATCGACCC GTCTGCCCCA TTAACGGAGA TCTGTTCCAC GCATGCCTGC
TGTATCCTGA TCTCGGGGAC GCTCTCGCCG GTCGACAGCT TCCGGCGGCT GTACTTCAAC
AATGCATCCG TTGCCACCCT TGCCCTGCCC AACTCGTTTC CCAAAGAGAA CCGCATCATC
TGCTGCGCAA ACGATATTAC AACAGCATAT TCCCTCCGCC AGAGCAGAGA GAACACCGAG
AAGATCGTGC AGTATATTAC CGTGTTTGCC GCACTCAAAA AGAACCGGGC CATCTACTTT
CCCAGTTACC AGATTCTTGA ATCCTACGCA TCGCTTGCCT CCTCCCACAT CAGCAGAAGG
AAGATCTACA TTGAACCCCG TGATGCGGCA GGAGCAGGGG CTGCTCTTAA TGAGTTCCTC
TCCCTTCCCG CACAGGGGGA CTCAGGGATC ATGTTTGCGG TCTGCGGGGG AAAATGGAGT
GAAGGGCTCG ACTACCGGGG GGAAATGCTT TCCGGGGCGA TGGTGGTGGG CCTGCCGCTT
GCCCCGTTTA CCCGGGTCAG AAAGATGGTT ATCGAGTACT TCCGGCACAA ATATGGTGAC
GAAGGCGAAT TCCTCTGTTA TACCCTCCCA GCGATCAACC GGGCCCTCCA GGCGCTCGGT
CGCGTGCTGC GCACTCCCGA GGATCGCGGT GTTCTTGTCT TTGCCGAACG CCGGTTTTTG
GAAAAGCGTG TTTACTCGGC CCTGCCCTTA TGGATCCGGG ACGAGATGAT CGAATGTGAT
TTCACAAAGT TCCGGGAGGT ACTTGGGAAA TGGAAGTGA
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| Protein sequence | MYGFGVQRSL PAKKSGRSAI QKAGYMFTPH PTPIKHPAAN GTPAMDSFDP FFPYSEYRPH
QREMLTFAAQ IARDGGIGMI DAPTGSGKSS VISALLAERR GRKIVIAVRT VSQLTTFVRE
LALVKKKRPD LKTVYLVGKK SICPLGGEGD IYRRCEGVKT FSTALMRERA ERGALVPIKD
PFIVQQIRKM DREHPLLCPY FIASRQFVPG ESGGVKMIPS AQVRSKADRM LDDPVRPQEL
GGFSGDICPY ELVLSAAKNA DVVILNYHHL FDRVIREQLY ANLNVEDQDV MLLIDEAHNC
GDVIQSVESI ALAQKDIEQA TRELSGMRRL HKGAEAVQHV LPRLSEFMAG LANSSEPEDW
FDPGIFDRAI VKGSLWKDMG DIVDELMGLA ETIREKNQKS GEFRETAIER LTLFMYRLSQ
SANNPAYLTI YKRTDEGILL EVRNIDPSAP LTEICSTHAC CILISGTLSP VDSFRRLYFN
NASVATLALP NSFPKENRII CCANDITTAY SLRQSRENTE KIVQYITVFA ALKKNRAIYF
PSYQILESYA SLASSHISRR KIYIEPRDAA GAGAALNEFL SLPAQGDSGI MFAVCGGKWS
EGLDYRGEML SGAMVVGLPL APFTRVRKMV IEYFRHKYGD EGEFLCYTLP AINRALQALG
RVLRTPEDRG VLVFAERRFL EKRVYSALPL WIRDEMIECD FTKFREVLGK WK
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