Gene Mboo_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1102 
Symbol 
ID5411262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1096591 
End bp1096983 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content52% 
IMG OID640868328 
Productresponse regulator receiver protein 
Protein accessionYP_001404263 
Protein GI154150645 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.863514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGAA TTCTCATTGT CGATGATGAT GCAGATATTC TTGAACTACT GCGTCTTGAG 
TTTGAGGACG ATCCCGGATG CAGTGCAGAT TGCGTTACCG ATCCGGCCCG GGCGCTGGAA
CTGGCACGCA CTTCCCGGTA CGATGCGATT ATTACCGACT GGCGGATGCC GGAAATGACG
GGAGGTGAAT TTGTCCGGGC CCTGCGAAAG CAGGGATGCA GATCGTATAT TATCATCTAC
AGCGGCATGG ACCCGGACCA GGAGATGTTC CAGACTCTTG AGACCGATGC AGACCAGTAT
ATTCTCCGCC GGGGAAATCC TGACAGAGAA TTTGGAGAAT TAAAAGAGGG CATACGGGCC
CTTCCATTAC ATCCTGCTTC CACGGTGCCA TAA
 
Protein sequence
MTRILIVDDD ADILELLRLE FEDDPGCSAD CVTDPARALE LARTSRYDAI ITDWRMPEMT 
GGEFVRALRK QGCRSYIIIY SGMDPDQEMF QTLETDADQY ILRRGNPDRE FGELKEGIRA
LPLHPASTVP