Gene Mboo_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1098 
Symbol 
ID5410023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1091247 
End bp1091780 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content53% 
IMG OID640868324 
Productputative CheW protein 
Protein accessionYP_001404259 
Protein GI154150641 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.428476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTAA AGTCAGGTGA ACCATTGGCA GCGGAAAAAT CCCCGTCTGC ATCCCAGGGC 
GGCATGAGCT CCATCCAGGT CGTGGAGTTT GTGCTCGGAA ACGAGCATTT CGCCATCGAT
CTGTTCGATG TGAAAGAAGT TGTGGAGTAC ACCACGATCA CCAAGCTCCC CAATGTCGCT
CCCTATGTCC GCGGGATCAT TGATCTCCGG GGCGAGATCA CGATGATCAT TGACCTCAAG
CACCGCCTGA ACATCACCGA TGCGAGCACA ACCGCACTCG AAACCTCGCG GATCATTGTC
CTTGATGACA AGATCACCTC ATCCAAGGTT GGGATCCTGG TCGACGATGT GACCTCGGTC
TCCACCTTCG AAGGCAACCA GGTCGACCAT ACATCCGCAT CGATCAGTCA CGAGGATACG
GCAATCATCG GGATCATCAA GCGCAAGGTC AAGGTAAAAG ACAAGGAGAT AAACGAGCTT
ATCATCTGGA TCGACATAAA AAAACTGCTC GGCGATCTCG ATTCAGCGGC CTGA
 
Protein sequence
MTVKSGEPLA AEKSPSASQG GMSSIQVVEF VLGNEHFAID LFDVKEVVEY TTITKLPNVA 
PYVRGIIDLR GEITMIIDLK HRLNITDAST TALETSRIIV LDDKITSSKV GILVDDVTSV
STFEGNQVDH TSASISHEDT AIIGIIKRKV KVKDKEINEL IIWIDIKKLL GDLDSAA