| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1069 |
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| Symbol | |
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| ID | 5409797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1056782 |
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| End bp | 1062133 |
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| Gene Length | 5352 bp |
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| Protein Length | 1783 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640868295 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001404230 |
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| Protein GI | 154150612 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.62393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTT CTGGTTATCA TGCCCTAATG CTCCTTTTTA TTATCGGTCT TATCGCGATA
GCGATACTTC CCGGGATTAG CTCAGCGGCA CTTAAAGATA CCTCTACGGG AACTATATAT
CAAACCCTTG AAGATGCCGC AACGGCAAAT ACCGGCAGTG ATATCCTGTT CCTGATCAGT
AACACTTCGG TGACCCTGAC TCCTGGCAAG AACATTGTCC AGTTCCCGAA CACCATTACC
ATTCAACAAA ATAAGACATA CACAGGGGGG AAAACAGATA AAGACTTTAT ATTTGTCAAT
GCAACAATTG GATTTAACGG AAACTCCCAG ACCTATACAT TGTCTCCTAC CGGCAGTAGT
CATTTCCTCA TTTTCAGCTA TGATCAGACC GGAACATTCC AGAATAATTC CCTCTTCGAA
ATTACCGGGA ATTCGAATAC GTTTAATCTT GGTGAATCCC ATCCATCCCT GATCGCCGGG
AGTTTTACCG GTACCGGGGT AAACCTCACG GGGAATTACA ATTCTCTTAA TTCCTGGATC
GGTGAACTTG AAGACGCCAA TGGTGATGGC TATGCTTCCG ATCTGTCGAT AGTATTCAAT
CTGGCAGGCT CCTACAACAG CATCTCTGAC ACCCAGTCCT GTCCCCTGAA TACCCAGGCG
AGCGGGGGGA TAGGGCTAAA AGTGACAGGT AATTTTAATG GAGCACCCGG GTCAGCCAGT
GTAACAAGTC CGCCGACATC GGGCGAGACT TCCCCACCTA TCTATATCGA CACCAGCCAG
ATTTACAGTG CTCCCGGGGG GAAAATCTAT ATCGCTCCTT CAGCTAACGG GAATGTCATC
CGGGATGATA ATTTCAATCT GAATACGCAG CCACAGATCT ATCTCTCGAA TGGAACTGCA
GGCACACAAA CAACCTCCTG GTATTTCTTC AACAGCTCCT GGTCGCCTTC CGGCGGGAAC
AGGAACCTGA CCATCGATAC TTCGCAATGG TCTTTCCCGT TTGGAGGAAA CGTAAGCCTG
GTTGCCGGTA TTTCCAACAT TACCGGGCAG TCGACAGATA TTATTCAGAA CAGCTCCCTG
TTCCTGGATT CTACTACCGG AGAATCGAGC GGGATCCTGA AAAATGACAC AAGCTCCCTG
AAATTCAACA CTATCTCTGC TGTTGTCCCG GTGGGGATGT CGATTGGGAA TAATACGTAC
CTCGATAAAA ATAACAATAT TGTATCTACT CCTGGATCCC TGGGTTACGT AACCGTCCTT
GATTTCAACC CCTACTACTC CCTGCCGAAC GAGAACTTCA ACAGTACCCG GACAACCGAC
TGGAGTTCGA TACCGGATTT CACTGCAGCC CATAATCTCA CGTTAGTAGT CGAGAACAAG
ACATCGCATG CATTGCTGGG GAATATCAGT TACAACCAGG ATCTCGATCT CTTGACATCT
GGTGTTGATT CAGGTCTTGC CGTGCTCGGG AATAATCTCG CCATATCCTC GACCGGTAAC
AGCACCAACT TTACGATGAC TAACGCGGAA CTGAATTCCG TATTTAATAA CCCGGCCACC
CTGACCATGT ATCCCAACAA CTTCCCGTTC GCCGGTTATG GGAATATTAC TATCACGGCT
ACCACTGATT CGGGCACAAC GACAACACTA TTCGATAAAG GCACCTGGCT CAATTATGCC
GGTTTCGTCA ACTATCCTTC ACAGAATGTC ACAGTTATCG GTAACTCCAG TATTTCACTC
CCGGTCCTCC ATTTCAGCAA ATACGATTTC TTTGAAACGG CTCCGGTCGC AAACTTCACC
GGCACACCGA CGAACGGAAA TGCTCCACTT ACCGTGCAAT TCACCGATAC CTCGGCCTAC
AGCAACCCGG ATTCCTGGAA CTGGTCGTTT GGAGATGGCA ATTTCTCAGT TGCACAGAAC
CCTGCGCATA CGTACGTCTC TGCGGGCAGC TACACGGTTT CCCTGACTTC TGCCGATGTC
GGGGGGTCCA ATACGACCAC GATTGCAAAT TACATCAACG TCTCGGCGGC CCTGCCTGTT
CCGATCTTCA CCGGGACTCC GACTTCCGGC GCAGAGCCAC TGAATGTCCA GTTCAACGAT
ACTACCCCTG GAACCGGTAT CCAGTACTGG AACTGGTCGT TTGGAGATAC CACCTGGTCC
AATACAACAG ACGTGACGGC AAAGAACGTA ACACACCTGT ACACAGCCAT CGGCAGTTAC
ACGGTAAGCC TCTCGGTCAC CAATTCATCG GGAATAAGCT CCCCGGCAAC CGTTACCAAT
ACGACCACGA TTGCAAATTA CATCAACATC TCAGCGGCCC TGCCTATTCC GATCTTCACC
GGGACTCCGA CTTCCGGCCC CGAGCCATTG AGTGTCCAGT TCAACGATAC TACCCCTGGA
GCCGGTATCC AGTACTGGAA CTGGTCGTTT GGAGATGCTA CCTGGTTCAA TACAACAGAC
GTGACTGCAA AAAACGTAAC TCACCCGTAT TCTTCGGCCG GTAGCTACAC GGTGAACCTC
TCGGTCACTA ATTCATCAGG GCTGAGTTTC CCTGCGACCA TTACCAATAC GACCACGATT
GCAAATTACA TCAACGTCTC GGCGGCCCTG CCTGTTCCGA TCTTCACCGG GACTCCGACT
TCCGGCGCAG AGCCACTGAG TGTCCAGTTC AACGATACTA CCCCTGGAAC CGGTATCCAG
TACTGGAACT GGTCGTTTGG AGATGGAAAC TGGTTCAATA CAACTGATGT CACGGCAAAA
AACGTAACGC ACCCGTATAC CGCCATCGGC AGTTACACGG TAAGCCTCTC GGTCACCAAT
TCATCGGGAA TAATCTCCCC GGCAACCGTT ACCAATACGA CCACGATTGC AAATTACATC
AACGTATCAG CGGCCCTGCC TATTCCGATC TTCACCGGGA CTCCGACTTC CGGTTTCGAG
CCGTTGAGTG TCCAGTTCAA CGATACCACC CCAGGAACCG GTATCCGGTA CTGGAACTGG
TCGTTTGGAG ATGCTACCTG GTTCAATACA ACGGACGTGA CTGCAAAAAA CGTAACTCAC
CCGTATTCCT CGGCCGGTAG TTTTTCGGTA AGCCTCTCGG TCACCAATTC ATCGGGACTG
AGTTCCCCGG CAACCATAAC CAACACGACA AAGCTTGCAA ATTATATCAA CGCGTCAGCG
ACCCTTCCCA TTCCGGTCTT TACCGGTACA CCGACATTCG GTCATGAGCC GCAAAATGTC
CAGTTCAATG ATAGCACGTC GGGGACTGGC ATCCAGTACT GGAACTGGTC GTTTGGAGAT
GGAAACTGGT TCAATACAAC CGATGTCACG GCAAAAAACG TAACTCACCC GTATACAGCC
ATCGGCAGCT ACACGGTAAG TCTCTCGGTC ACCAATTCAT CAGGAATACT CTCCCCGGCA
ACCGTTACCA ATACGACTTC GATTGCAAAT TACATCAACA TCTCAGCCGC CCTCCCCATT
CCGGTCTTTA CCGGTAACCC GACATCCGGT CACGCGCCGC TGAGTGTCCT GTTCAATGAT
AGCACGTCGG GGACTGGCAT CCAGTACTGG AACTGGTCGT TTGGAGATAC CACCTGGTCC
AATACAACTG ACGTGACGGC AAAAAATGTA ACCCACCTGT ATTTGTCAGC CGGCAGTTAC
ACGGTGAACC TCTCCGTCAC CAATTCATCG GGGCTGAGTT CCCCGGCAAC CATTACCAAC
ACGACTTCCA TCCTGAATTA TATCAGTATC ACGGGCCCGC TGCCGGTCCC CTCATTTACC
GGATCGCCCC GGGGCGGGAA TGCGACGCTG GTTGTACAAT TCAATGACAC TTCCATATCC
CCGGGCATCA CGGCATGGAA CTGGTCATTT GGCGATAGTG GCTGGTCCAA CACCACCAAT
GTTCTTCTCC GGAACGCCAC CCATCAGTAT TCAGTGCAGG GATCGTATAC GGTGAACCTC
TCCGTAACCA ATTCATCGGG ATCAAATACC ACGTCACAGA CGGGGTACAT TGTCGTAGGC
CCCCCCCTTC CCATTCCGGA CTTCACAGGA TCGCCAACCC ACGGGAACCC TCCTCTGGCA
GTGCAGTTCA ACGATACCTC GACATCTCCC GGCATCAACT CCTGGAACTG GTCGTTCGGT
GATAATATCT GGTTCAATAC GACCGACATA ACCGTCCGGA ATGCGTCCCA CACGTATTCA
TCGACAGGTA CTTTTACCGT GAACCTGACG GTTACCAATA CAACCGGCGT TAACACCACA
AGCCGGTCGG GGTACATTTC CACGCTCCCC TCCCTGCCGA TCCCCGCATT TACCGGTTCA
CCGGTATCGG GTCTTGCCCC CCTGTTCGTC CAGTTTACTG ATACGTCGAC ATCGCCGGGC
ATCAACTCCT GGAACTGGTC GTTTGGCGAT GGCAGCTGGT TTAACACTTC CGATGCCACC
CAGAGAAACG CAAATTATAC CTATGTCAAT GCCGGCAGTT ACACGGTGAG CCTCTCGGTC
TCCAATACTT CGGGGACTAA TACGACAACC CGGAATGGTT TTATCACTGC CACCAGCTCC
AGCTCTTCCG CCCCGGCATC GCCCGGAAGC AGCGGCGTCT CGTCAAGTGT AGGTGGTTCA
ACTGCGGTGA CTCTCTCTAG CGTCCCCTCA GGACAAACGG CGATATTTTC CTTTGACCAG
AATCCCAATC CCGTTCAACC GGTTGCCGTC ATCCAGGTCC AGGTCGTACC TTCACAAAAC
CTGGGAACCG TGGAGGTAAT CGCGTTGCCT GCAACTATCG GTAAACCCCT GGAGGGGACC
GTTGCCGGTT ATATACTTAT CAATCTCGTT GGCGTCAATC CGGATGCAGT CGACCATGGT
GTTATCACCT TCTCCGTCAT TGAAGAATGG CTTGGCAACC ACCAGGTAAA CCCTGCAAAT
ATCGTACTGA TGCGCGAGCA CAACAATCAA TGGACAGCAT TGCCAACCAC CTTTGATCAC
CAGGACGGGG ATTACTATTA TTTCGATGCA ACTACGCCAG GTTTCTCGTA CTTTGCCGTA
GTGGCGCAAT CCCCGGGAAC TACCCCGGGG GCGACCGTGA AATCAACACC CGCTCCGGCA
ATAACACCGA TTACCCCGGT CGTCACCACA GTGCCGACCT ACGCGATTGT TCAGCGTACC
CCGATTGTAT CACCGGTGAC CGTGGGAACG ACTGCGGTTC CGGCAACATC GGCACCCTCG
ACGTCTTCCG GTATCCCGAT CAATGTGTTC GCAGCGATCG GCGGGATCGT AATTGTCCTT
GGGGGAATCC TCCTCATCAG ACGATGGTGG ATACGAAGAC AAAATCCGGC ATTATTCCGG
AAATATGACT GA
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| Protein sequence | MKLSGYHALM LLFIIGLIAI AILPGISSAA LKDTSTGTIY QTLEDAATAN TGSDILFLIS
NTSVTLTPGK NIVQFPNTIT IQQNKTYTGG KTDKDFIFVN ATIGFNGNSQ TYTLSPTGSS
HFLIFSYDQT GTFQNNSLFE ITGNSNTFNL GESHPSLIAG SFTGTGVNLT GNYNSLNSWI
GELEDANGDG YASDLSIVFN LAGSYNSISD TQSCPLNTQA SGGIGLKVTG NFNGAPGSAS
VTSPPTSGET SPPIYIDTSQ IYSAPGGKIY IAPSANGNVI RDDNFNLNTQ PQIYLSNGTA
GTQTTSWYFF NSSWSPSGGN RNLTIDTSQW SFPFGGNVSL VAGISNITGQ STDIIQNSSL
FLDSTTGESS GILKNDTSSL KFNTISAVVP VGMSIGNNTY LDKNNNIVST PGSLGYVTVL
DFNPYYSLPN ENFNSTRTTD WSSIPDFTAA HNLTLVVENK TSHALLGNIS YNQDLDLLTS
GVDSGLAVLG NNLAISSTGN STNFTMTNAE LNSVFNNPAT LTMYPNNFPF AGYGNITITA
TTDSGTTTTL FDKGTWLNYA GFVNYPSQNV TVIGNSSISL PVLHFSKYDF FETAPVANFT
GTPTNGNAPL TVQFTDTSAY SNPDSWNWSF GDGNFSVAQN PAHTYVSAGS YTVSLTSADV
GGSNTTTIAN YINVSAALPV PIFTGTPTSG AEPLNVQFND TTPGTGIQYW NWSFGDTTWS
NTTDVTAKNV THLYTAIGSY TVSLSVTNSS GISSPATVTN TTTIANYINI SAALPIPIFT
GTPTSGPEPL SVQFNDTTPG AGIQYWNWSF GDATWFNTTD VTAKNVTHPY SSAGSYTVNL
SVTNSSGLSF PATITNTTTI ANYINVSAAL PVPIFTGTPT SGAEPLSVQF NDTTPGTGIQ
YWNWSFGDGN WFNTTDVTAK NVTHPYTAIG SYTVSLSVTN SSGIISPATV TNTTTIANYI
NVSAALPIPI FTGTPTSGFE PLSVQFNDTT PGTGIRYWNW SFGDATWFNT TDVTAKNVTH
PYSSAGSFSV SLSVTNSSGL SSPATITNTT KLANYINASA TLPIPVFTGT PTFGHEPQNV
QFNDSTSGTG IQYWNWSFGD GNWFNTTDVT AKNVTHPYTA IGSYTVSLSV TNSSGILSPA
TVTNTTSIAN YINISAALPI PVFTGNPTSG HAPLSVLFND STSGTGIQYW NWSFGDTTWS
NTTDVTAKNV THLYLSAGSY TVNLSVTNSS GLSSPATITN TTSILNYISI TGPLPVPSFT
GSPRGGNATL VVQFNDTSIS PGITAWNWSF GDSGWSNTTN VLLRNATHQY SVQGSYTVNL
SVTNSSGSNT TSQTGYIVVG PPLPIPDFTG SPTHGNPPLA VQFNDTSTSP GINSWNWSFG
DNIWFNTTDI TVRNASHTYS STGTFTVNLT VTNTTGVNTT SRSGYISTLP SLPIPAFTGS
PVSGLAPLFV QFTDTSTSPG INSWNWSFGD GSWFNTSDAT QRNANYTYVN AGSYTVSLSV
SNTSGTNTTT RNGFITATSS SSSAPASPGS SGVSSSVGGS TAVTLSSVPS GQTAIFSFDQ
NPNPVQPVAV IQVQVVPSQN LGTVEVIALP ATIGKPLEGT VAGYILINLV GVNPDAVDHG
VITFSVIEEW LGNHQVNPAN IVLMREHNNQ WTALPTTFDH QDGDYYYFDA TTPGFSYFAV
VAQSPGTTPG ATVKSTPAPA ITPITPVVTT VPTYAIVQRT PIVSPVTVGT TAVPATSAPS
TSSGIPINVF AAIGGIVIVL GGILLIRRWW IRRQNPALFR KYD
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