Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1012 |
Symbol | |
ID | 5411748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 992784 |
End bp | 993401 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640868238 |
Product | putative transcriptional regulator |
Protein accession | YP_001404173 |
Protein GI | 154150555 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.27626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGGA TACCCAGTGA ACCAGGCATG GGGCCGGCGG CCCCTGCTGC AGTAGAAGAA GAGATCGTCT TTCTTGAACC AGGACAGGAA AAAGCGCAGA ATATCGCAAA AGCCATCTCG CACCAGAACG CCGGCGATAT CATGTCCCTT CTCTCGACCG AAGGGCCCAT GAAGCTCTCG GATATTGCCA CCCGGATGGA TCTCTCCACC AATGCGGCAA AGTACCATGT GGAGAACCTC AAAAACGCCG GGCTTATCGA GATCGCAAAT ACCCGGTACA GCGTCAAGGG CAAGAAGATG AAGGTGTACC GGCTTAAAAA CCAGGTCTTC ATTGTAGCCC CCGGTATGGT ATCCGGCCCG GCACTCCGGG CGGTGCTGTT GAAATACGCG TCCCTCTGCG GGATCTTTAT TGTGGCGTTT GGGCTCTTTG TGGTCCAGCC GTTTGTCACA TTCTCGCCCG GATCGCCTGG CAGCATATCC GGCTCGATCT GGCAGGGTAC GACACTGCCT GCCGCATATC CCTCGCCCCT TGTCCCGGCC CTCGTCCTTG CCGGGATCGT AACCCTGCTT GTGTTTGCCG GTACTGAAGT GCTCGAATAT GGGAAAAACC GGGCCTGA
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Protein sequence | MNGIPSEPGM GPAAPAAVEE EIVFLEPGQE KAQNIAKAIS HQNAGDIMSL LSTEGPMKLS DIATRMDLST NAAKYHVENL KNAGLIEIAN TRYSVKGKKM KVYRLKNQVF IVAPGMVSGP ALRAVLLKYA SLCGIFIVAF GLFVVQPFVT FSPGSPGSIS GSIWQGTTLP AAYPSPLVPA LVLAGIVTLL VFAGTEVLEY GKNRA
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