Gene Mboo_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0977 
Symbol 
ID5409826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp961266 
End bp961640 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content58% 
IMG OID640868203 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001404138 
Protein GI154150520 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.363566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0295243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC CTGCGGCAAC AGGGGGCAAT ATCTGCCTCT GCCCCCTCTT TGGCCTGCTT 
GACGTGGTGG CAAAGAAATG GGCGTTTTTA ATCATTGCGA TACTGGGAAA CGAAGGGGCA
AAGGGATTCA ACGAATTAAA AAACGAGCCC GGCCGGATCA GCCCCAAGAC GCTCTCGGAG
ACGCTCAAAA ACCTGGAGCG GATCGGGCTT GTAGACCGGA AGATCCTTAC CACCTCGCCG
CCGACAACAC AGTACTCGCT GACCGGTGAC GGACAGGAGT TACGGGAACA CCTGATCCCG
CTGCTTCTCC GGGTGTCCGA GCGGGGTGCG CAGGACCTCC CCGGCTGCCC GGTCCGGATG
CGAAAAGAAC AGTGA
 
Protein sequence
MNKPAATGGN ICLCPLFGLL DVVAKKWAFL IIAILGNEGA KGFNELKNEP GRISPKTLSE 
TLKNLERIGL VDRKILTTSP PTTQYSLTGD GQELREHLIP LLLRVSERGA QDLPGCPVRM
RKEQ