| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0936 |
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| Symbol | |
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| ID | 5410053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 919568 |
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| End bp | 923101 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640868162 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_001404097 |
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| Protein GI | 154150479 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.194621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0190935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATG AAAATAGCCG TACGGGGTCG CAGGGAAAGC CCGGGGAAGG CCCGGTGCGG
GATGCCGGCG ATTATTCATT AAGGCTTTTT GATGATTTTC CAAATCCCAT CTGGCGTTCG
GGGCAGGATG CGAAGTGCAA TTATTTTAAC CGGGAATGGC TCGCATTTAC CGGCCGGACC
CTGGAGCAGG AACTGGGCTT CGGGTGGACA GAGGGGGTGC ACCCTGAGGA TCGTGACCGG
TGCCTGAAAA CCCTGCGTGA TGCCTTTGAC CGCCGTGCGC CTTTCGAGAC AGAGTACCGG
CTCCGGTACC ATGACGGCAC CTACCGCTGG CTCCTTGACT GCGGGAAACC GTACCACAAT
CCCGATGGCA CATTTGCCGG GTACCTTGGC TCCTGTTACG ACATCCATGC CCGCAGGGAA
GCGGAGATCG CCCTTCTGGA AAGCGAGAAG CGGTACCGCG ACATGTTCGA GATCAACAAT
GCAGTAATGT TCATTGTGGA TCCGGAGAGC AGGCAGATTG TGGATGCAAA CGCCGCTGCC
TGCCGGTTTT ACGGCTACTC ACGGGACGAG ATGCAGCATC TCCTTATCAC GCAGATCAAT
ATCCAGGACC CGCAAAAAAC CACAAAGGAC ATGGGTGTTG CGGCCGCAAG CCCCGGGTCC
GTGTTCCAGT TCCGGCACAA AAAAAAGAAC GGCGAGATCC GGGATGTCGA AGTCTTCAGC
GGCACGGTGT ACTTTGGGGG CCGTAAGCTC CTGCATTCCA TTATCCAGGA TGTGACAGAC
CGCACACGGG GAGAGGAAGC ACTCAAAGAG AGCGAAACGC AGTACCGCGA CCTGGTCGAG
AACGTAAGCG AGGTTATTGT CTCTCTGGAC CATGAGGGGA AATTTACCTA TGTCAGCCCT
GTTGCACAAC GGCTGTATGG CTATGCTCCC CAGGAGCTGA TCGGGAAGAA TTTCCTGCAG
TTTGTCCACC CGGATGACCG CGACCGCGTC ACGGATGTGT TCAGGAAAGA ACTGTCCGGG
ATATACCTGG CTGATGAGTT CAGGGTCCTT GCACAGGACC ACTCGATCCA CTGGATCAGC
GTTGCGCCAC GCCCGATCGA ACGGGACGGG AATGTTGTCG GTTTCAATTA CGTGATGACC
GATTTCACCG GCAGGAAAAT AGCCGAAGAG GCGTTGCGCG AGAGCGAGCA GAAATTCCGC
GAGATTTTCA GCAATATTAA CGACGGGGTT GAAATCCACG AGCTGCAATC CGATGGTCTT
CCCGGGAAGT ATGTGGAGGC AAACGAGGTC TCCTGCCGGA TGCTTGGGTA TACGCGGGAG
GAACTGCTGA AGATGGGCCC GTTTGATGTT GCCATTGATT ACCAAAACCC CCCCATCACC
GAGATCGCCC GGCAGTTCCT TACGCAGGGG CGGTCCCGGT TCGAGACCGG CCACCGCAAC
CGCCAGGGGA CAGTTATCCC GGTGGAGATC AATGCCCATG TCATTTCCCT TGGCGGGAGG
AAGCTGGTGC TCTCTGTTGT CCGGGACATA ACTGCCAGGA AGAAAGCCGA GAAGGAAGAA
CAGCTCACCC GCGAACGGTT CGAGACGCTG GTAAAGATCG CCCGGATAGA GGATGCGGAC
GAACAGGAGA TATCCGAATA TATCCTGCAG GCCGCACGCC ACATGACCGG AAGCACGCTT
GCGTTTATCG GGAGAATGAC ACCGGATGAA TCCGTGATGG AGATTGAGTT CTGGTCGTCA
TCGGTCATGA AAGAATGCAG TGTCCCTTCA TCGTTCTTTC ATCTCCCTGT ACAAAAAGCC
GGCCTCTGGG CGGATGCGGT ACGGACCCGC CAACCAAAGA TCGTCAACGA TTATGCCCCC
TCCCCCGGCG GGAAAGGGTT GCCATCAGGG CATGTGAACA TCACCCGGTT CCTTTCGCTG
CCCATCCTTG ACAACGGGAA AGTTGTGATG GTCGCAGCGG TGGCAAACAA GCCCGAGCCT
TATGATGACG CCGATGCGAC CCGTTTAGCC CTCCTGATGC AGGGCGTATG GGGGCATCTC
CAGCAGCGGA GAGCGGACGA AGCGCTGCGC GAGAGTGAAG AGAAATTCCG GCTCTTCTTT
AACAACGTCA ACGATGCAGT CTATGTCCAT CAGATTGATC CCGACGGGAA GCCCGGCAGG
CTGGTAGAAG TCAACGATAT CCTGTGCCAT AATCTCGGGT ACACGCGGGA GGAACTCCTT
TCGCTGTCGA TACCGGATAT CCTCAGTGAG GCAGGTCTGC GGCGGATTCA GGAGACTTCA
GGAGTGATTG ATCATGCCGG CCAGGCCATC TTTGAAACCG AACATCGCCG CAAGGATGGC
AGCATTGTTC CGGTCGAAGT GAGTACCCAC CGTTTCACCC AGGGAAAGAT TCTGCTTGCG
CTGGCAAACG CCCGGGATAT TACCGAGCGC AAAAAGGCGG AAGAGGCACT CCTTGCAAGT
GAACAGAAGT TCCACGATAT CTTCAACAAT TCGACAGATG CGATCCACAT CAACGAGATC
GGCGAGGACG GCTTGCCGGG GCGGTTCTCT GATGTCAACG AGGTCACCTG CCGTATGCTC
GGGTACACCC GGGAGGAGAT TCTGGCACTG GGCCCACAGG ATATTGCAAC ATCCTACCAC
GATCCCCCGG TGGAGAAGAT CCTTGAAGAC CAGCGGACAA AAGGTGCGGC GCGGTTCGAG
ACAGAGTACC GTACCAGGAA CGGGGGGATC ATCCCGGTCG AGATCATCAC CCACCGCATG
ATTCTCCAGG GCCGGCCGGT AATGCTTGAG GTTGTCCGGG ACATCACGGA TCGTAAAAAG
GCTGAGGCCC TCCTTCGCGA TTTCAACTGT GAACTCGAAG AGCAGGTAAA AGCCCAGACC
GAAAAGATCA ATGCCTCGTT AAATGAGAAG GTTCTTCTCC TTCGCGAGAT CCACCACCGG
GTGAAAAATA ACCTCCAGCT GATAATCAGC CTGACCAATC TCCAGATGCG GGAGAGCAGT
AACCCGCAAC TGATCCAGAT GATGAAAGAG ACGCAGAACC GTGTCCGGGC AATGTCGCTT
GTGCACGAGC GGCTGTACCA GTCAGATGAC ATTGCCCGGA TCAACCTCGC CGATTATACC
CGGTTCCTGG CTACCCAGAT CTTTGGATTC TACGGGACCA GTGCCCGGCA GGTAAAACTC
ACCCTTGATG TGGACCGGAT CATGCTGGAT ATCAACACCG CGATCCCGAC AGGGCTTATC
CTCAACGAGC TGGTCAGCAA TGCGCTTAAG CACGCATTCC CGGACAACCT GGTCGGGGAA
GTCTCGATTA CTGCACGCGA GGAAGGAAAC GCCTTTGTCC TCCAGGTCAG GGACACCGGG
ATAGGGATGC CTGCGGGGTT TGACTGGAAA GAGAGCCAGA CGCTCGGCCT GCGCCTGGTA
TGGATCCTTA CCGAGCAGCT CAACGGGACG GCCGAACTGC TGCCGGCAGA AAAGGGTACG
GCATTTTCTC TCCGGCTCAC CAAGGCAAAG GGAACGGACA GCACCGGGAT GTGA
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| Protein sequence | MNDENSRTGS QGKPGEGPVR DAGDYSLRLF DDFPNPIWRS GQDAKCNYFN REWLAFTGRT
LEQELGFGWT EGVHPEDRDR CLKTLRDAFD RRAPFETEYR LRYHDGTYRW LLDCGKPYHN
PDGTFAGYLG SCYDIHARRE AEIALLESEK RYRDMFEINN AVMFIVDPES RQIVDANAAA
CRFYGYSRDE MQHLLITQIN IQDPQKTTKD MGVAAASPGS VFQFRHKKKN GEIRDVEVFS
GTVYFGGRKL LHSIIQDVTD RTRGEEALKE SETQYRDLVE NVSEVIVSLD HEGKFTYVSP
VAQRLYGYAP QELIGKNFLQ FVHPDDRDRV TDVFRKELSG IYLADEFRVL AQDHSIHWIS
VAPRPIERDG NVVGFNYVMT DFTGRKIAEE ALRESEQKFR EIFSNINDGV EIHELQSDGL
PGKYVEANEV SCRMLGYTRE ELLKMGPFDV AIDYQNPPIT EIARQFLTQG RSRFETGHRN
RQGTVIPVEI NAHVISLGGR KLVLSVVRDI TARKKAEKEE QLTRERFETL VKIARIEDAD
EQEISEYILQ AARHMTGSTL AFIGRMTPDE SVMEIEFWSS SVMKECSVPS SFFHLPVQKA
GLWADAVRTR QPKIVNDYAP SPGGKGLPSG HVNITRFLSL PILDNGKVVM VAAVANKPEP
YDDADATRLA LLMQGVWGHL QQRRADEALR ESEEKFRLFF NNVNDAVYVH QIDPDGKPGR
LVEVNDILCH NLGYTREELL SLSIPDILSE AGLRRIQETS GVIDHAGQAI FETEHRRKDG
SIVPVEVSTH RFTQGKILLA LANARDITER KKAEEALLAS EQKFHDIFNN STDAIHINEI
GEDGLPGRFS DVNEVTCRML GYTREEILAL GPQDIATSYH DPPVEKILED QRTKGAARFE
TEYRTRNGGI IPVEIITHRM ILQGRPVMLE VVRDITDRKK AEALLRDFNC ELEEQVKAQT
EKINASLNEK VLLLREIHHR VKNNLQLIIS LTNLQMRESS NPQLIQMMKE TQNRVRAMSL
VHERLYQSDD IARINLADYT RFLATQIFGF YGTSARQVKL TLDVDRIMLD INTAIPTGLI
LNELVSNALK HAFPDNLVGE VSITAREEGN AFVLQVRDTG IGMPAGFDWK ESQTLGLRLV
WILTEQLNGT AELLPAEKGT AFSLRLTKAK GTDSTGM
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