Gene Mboo_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0920 
Symbol 
ID5410085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp901960 
End bp902847 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content60% 
IMG OID640868146 
Producthypothetical protein 
Protein accessionYP_001404081 
Protein GI154150463 
COG category[R] General function prediction only 
COG ID[COG1821] Predicted ATP-utilizing enzyme (ATP-grasp superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0220945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000622111 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGTCC TGCTTGCCGA GTATACCACC GCCCGCGATC CTGCACTTGC TCCCGAAGGG 
GCGGCGATGC TCGATGTCCT TGTACAGAGT TTTACCCGGT GCGGGTACGA GGTTGTGCTT
CCCGGTCCCG GCGATTTTTA CGAAGAGATC GTGCGCCTCG CCCCTCTCTG CGATATGGGT
CTTGTAATTG CACCTGATCA TCTGCTTGCA AAGTTCACCC TCCCGATCGA ACAGTATTCG
CATAACCTTG GCTGCGGGAG CATGAATGCC GCGGTGGCTG CAAACAAGGT GACCACCGGC
CGGGTCCTGC GGGGTCACGG GGTTGCGGTG CCGGCCGATG CACCCTCCGG CCGGCACGTG
GTAAAGCCGG TGTCCGGTTG CGATTCACAG GGTGTCCGGC TTACCGCCGA ACTTCCCGGA
AAAGGAGAAT TTGCGGAGGA ATACCTCGAA GGCGAACAGT ACTCGGTAAG CCTTGTGCTG
AGCCGGGTGG TAGGCGAGGC ATGCCTGTAC TTCTCCGGCA ATCCCCCGCT TGTCCTTTCC
GTGAACCGGC AGGATGTGAC GCTCAACCCG GATGGCGAGT TTGCCTATGC CGGCGGTGAG
ACCCCGGTTC ATCCCCCGCG TGAAGCAGAG ATCCTTGATG CTGCCGTAAA GGCTGCAACG
GTGCTTGGGT GCCAGGGGTA CTGCGGCGTC GATGTTATCG TGGGCGACAA GGTGTACGTG
GTCGACGTAA ACCCGAGAAT CACCACAAGC CTTGTCGGGA TTGCTGCCTG TATGAAAGAG
GAGATTGCCG AACTGCTGGT TGCCGCCTCA CAGGGAAATG CACCCCGCGA AGTGCACCTG
TCCGGCCGCG TGCGGTTCGA CCGGTCGGGA AAGGTCACCC GGTTATGA
 
Protein sequence
MKVLLAEYTT ARDPALAPEG AAMLDVLVQS FTRCGYEVVL PGPGDFYEEI VRLAPLCDMG 
LVIAPDHLLA KFTLPIEQYS HNLGCGSMNA AVAANKVTTG RVLRGHGVAV PADAPSGRHV
VKPVSGCDSQ GVRLTAELPG KGEFAEEYLE GEQYSVSLVL SRVVGEACLY FSGNPPLVLS
VNRQDVTLNP DGEFAYAGGE TPVHPPREAE ILDAAVKAAT VLGCQGYCGV DVIVGDKVYV
VDVNPRITTS LVGIAACMKE EIAELLVAAS QGNAPREVHL SGRVRFDRSG KVTRL